RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 CARD16Q5EG05 197 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 ERN2Q76MJ5 926 aaKnown RBP14.28□□□□□ -0.12
VTI1A-206ENST00000489142 SLCO6A1Q86UG4 719 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 TRIM69Q86WT6 500 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 RTL3Q8N8U3 475 aaKnown RBP14.28□□□□□ -0.12
VTI1A-206ENST00000489142 CPLX3Q8WVH0 158 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 ZNF653Q96CK0 615 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 HMCESQ96FZ2 354 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 PEBP4Q96S96 227 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 HEPHQ9BQS7 1158 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 TRPM6Q9BX84 2022 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 CEP44Q9C0F1 390 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 MAGEH1Q9H213 219 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 CAAP1Q9H8G2 361 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 PARVAQ9NVD7 372 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 AIPL1Q9NZN9 384 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 MYO1AQ9UBC5 1043 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 HECAQ9UBI9 543 aaPredicted RBP14.28□□□□□ -0.12
VTI1A-206ENST00000489142 PCSK1NQ9UHG2 260 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 HPCAL4Q9UM19 191 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 USP24Q9UPU5 2620 aa14.28□□□□□ -0.12
VTI1A-206ENST00000489142 TDRD6O60522 2096 aaKnown RBP14.27□□□□□ -0.12
VTI1A-206ENST00000489142 ASPMQ8IZT6 3477 aa14.27□□□□□ -0.12
VTI1A-206ENST00000489142 KMT2BQ9UMN6 2715 aaPredicted RBP14.27□□□□□ -0.12
VTI1A-206ENST00000489142 TLR4O00206 839 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 BUB1O43683 1085 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 PCDH8O95206 1070 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 ATXN1LP0C7T5 689 aaKnown RBP14.27□□□□□ -0.13
VTI1A-206ENST00000489142 PRKCIP41743 596 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 HNRNPDQ14103 355 aaKnown RBP14.27□□□□□ -0.13
VTI1A-206ENST00000489142 SHBQ15464 509 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 ZSCAN23Q3MJ62 389 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 SETMARQ53H47 684 aaPredicted RBP14.27□□□□□ -0.13
VTI1A-206ENST00000489142 CCDC157Q569K6 752 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 TDRD12Q587J7 1177 aaKnown RBP14.27□□□□□ -0.13
VTI1A-206ENST00000489142 SEL1L3Q68CR1 1132 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 PLEKHA7Q6IQ23 1121 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 UNQ6494/PRO21346Q6UXR6 183 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 SPATS2Q86XZ4 545 aaKnown RBP14.27□□□□□ -0.13
VTI1A-206ENST00000489142 ARFGAP1Q8N6T3 406 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 BAHD1Q8TBE0 780 aaPredicted RBP14.27□□□□□ -0.13
VTI1A-206ENST00000489142 ELF4Q99607 663 aaPredicted RBP14.27□□□□□ -0.13
VTI1A-206ENST00000489142 EPAS1Q99814 870 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 KDM4CQ9H3R0 1056 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 PREBQ9HCU5 417 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 GDF3Q9NR23 364 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 CNOT8Q9UFF9 292 aaKnown RBP14.27□□□□□ -0.13
VTI1A-206ENST00000489142 ZFR2Q9UPR6 939 aaKnown RBP14.27□□□□□ -0.13
VTI1A-206ENST00000489142 PCDHGB2Q9Y5G2 931 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 WDFY3Q8IZQ1 3526 aa14.27□□□□□ -0.13
VTI1A-206ENST00000489142 PLXNB3Q9ULL4 1909 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 A0A1B0GTQ1 180 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 RASA4BC9J798 803 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 KRIT1O00522 736 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 RASA4O43374 803 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 KDELR3O43731 214 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 KRT37O76014 449 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 TMCC1O94876 653 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 ADRB3P13945 408 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 ITGB7P26010 798 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 ETFBP38117 255 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 UBASH3AP57075 661 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 NXPH1P58417 271 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 TPI1P60174 286 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 TPM4P67936 248 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 SLC20A2Q08357 652 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
VTI1A-206ENST00000489142 SUZ12Q15022 739 aaKnown RBP14.26□□□□□ -0.13
VTI1A-206ENST00000489142 ZNF284Q2VY69 593 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 SLC45A4Q5BKX6 768 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 LRRC73Q5JTD7 316 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 DBX2Q6ZNG2 339 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 PARS2Q7L3T8 475 aaKnown RBP14.26□□□□□ -0.13
VTI1A-206ENST00000489142 RAB44Q7Z6P3 723 aaPredicted RBP14.26□□□□□ -0.13
VTI1A-206ENST00000489142 SKA1Q96BD8 255 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 PPP1R16AQ96I34 528 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 CELF6Q96J87 481 aaKnown RBP14.26□□□□□ -0.13
VTI1A-206ENST00000489142 VCPIP1Q96JH7 1222 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 SNRNP25Q9BV90 132 aaKnown RBP14.26□□□□□ -0.13
VTI1A-206ENST00000489142 HDAC8Q9BY41 377 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 DHX35Q9H5Z1 703 aaKnown RBP14.26□□□□□ -0.13
VTI1A-206ENST00000489142 TOR4AQ9NXH8 423 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 GGT7Q9UJ14 662 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 AP4E1Q9UPM8 1137 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 ITM2BQ9Y287 266 aa14.26□□□□□ -0.13
VTI1A-206ENST00000489142 ANKRD36A6QL64 1941 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 CACNA1BQ00975 2339 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 TMEM191CA6NGB0 347 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 GOLGA6L19H0YKK7 550 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 EEF2KO00418 725 aaKnown RBP14.25□□□□□ -0.13
VTI1A-206ENST00000489142 PCDHGA12O60330 932 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 SDC3O75056 442 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 UGT2B4P06133 528 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 DESP17661 470 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 MIPP30301 263 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 PBX1P40424 430 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 ABL2P42684 1182 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 NEK3P51956 506 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 CLDN2P57739 230 aa14.25□□□□□ -0.13
VTI1A-206ENST00000489142 BNIP3Q12983 259 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms