RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 GATA5Q9BWX5 397 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 STRA6Q9BX79 667 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 ATP13A3Q9H7F0 1226 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 IFT80Q9P2H3 777 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 SLCO3A1Q9UIG8 710 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 PCDHGC3Q9UN70 934 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 CDY2AQ9Y6F7 541 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 CDY1Q9Y6F8 540 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 ATP6AP2A0A1C7CYW4 349 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 TCAF2A6NFQ2 919 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 TK2O00142 265 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 ATP6AP2O75787 350 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 SERPINB1P30740 379 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 AVPR1AP37288 418 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 RHDQ02161 417 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 CREB5Q02930 508 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 XKR9Q5GH70 373 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 ARL13AQ5H913 290 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 RSBN1Q5VWQ0 802 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 UGT3A1Q6NUS8 523 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 CRTC3Q6UUV7 619 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 LYPD8Q6UX82 237 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 BBS12Q6ZW61 710 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 C11orf74Q86VG3 221 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 EPHX4Q8IUS5 362 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 ZBTB45Q96K62 511 aaPredicted RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 COQ7Q99807 217 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 SH3GL1Q99961 368 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 BBS2Q9BXC9 721 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 NEK6Q9HC98 313 aa16.4■□□□□ 0.22
MCF2L-229ENST00000488765 RAVER2Q9HCJ3 691 aaKnown RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 COPG1Q9Y678 874 aaKnown RBP16.4■□□□□ 0.22
MCF2L-229ENST00000488765 TEX28O15482 410 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 ICMTO60725 284 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 CDH1P12830 882 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 TFEBP19484 476 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 CXCR2P25025 360 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 TGFBR1P36897 503 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 CCNA1P78396 465 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 SLC39A4Q6P5W5 647 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 FAM20CQ8IXL6 584 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 ELMOD1Q8N336 334 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 NATD1Q8N6N6 113 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 ACVR1CQ8NER5 493 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 RP9Q8TA86 221 aaKnown RBP16.39■□□□□ 0.21
MCF2L-229ENST00000488765 DCAF4Q8WV16 495 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 SDCCAG3Q96C92 435 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 IDI2Q9BXS1 227 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 GIMAP4Q9NUV9 329 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 ANKMY1Q9P2S6 941 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 TBX20Q9UMR3 447 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 ADAMTSL1Q8N6G6 1762 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 TRIM38O00635 465 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 SNPHO15079 494 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 GLDCP23378 1020 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 PRKCHP24723 683 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 MIPP30301 263 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 AP3B2Q13367 1082 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 TMTC4Q5T4D3 741 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 SEL1L3Q68CR1 1132 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 RSBN1LQ6PCB5 846 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-229ENST00000488765 BPHLQ86WA6 291 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-229ENST00000488765 CCDC60Q8IWA6 550 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-229ENST00000488765 NIM1KQ8IY84 436 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 CDK5RAP1Q96SZ6 601 aaKnown RBP16.39■□□□□ 0.21
MCF2L-229ENST00000488765 OLFM1Q99784 485 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 SCUBE2Q9NQ36 999 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 PCDHGA11Q9Y5H2 935 aa16.39■□□□□ 0.21
MCF2L-229ENST00000488765 MAGED1Q9Y5V3 778 aaPredicted RBP16.39■□□□□ 0.21
MCF2L-229ENST00000488765 PEX10O60683 326 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 TMCC2O75069 709 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 GLRA3O75311 464 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 RSL1D1O76021 490 aaKnown RBP16.38■□□□□ 0.21
MCF2L-229ENST00000488765 IL7RP16871 459 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 RAB15P59190 212 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 CUL2Q13617 745 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 DPYSQ14117 519 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 ANKRD13BQ86YJ7 626 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 DLG3Q92796 817 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 ALOXE3Q9BYJ1 711 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 CHRAC1Q9NRG0 131 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 MTRRQ9UBK8 725 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 PSME2Q9UL46 239 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 BPTFQ12830 3046 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 FARP2O94887 1054 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-229ENST00000488765 GCNT1Q02742 428 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 CXCL9Q07325 125 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 PPP1R8Q12972 351 aaKnown RBP16.38■□□□□ 0.21
MCF2L-229ENST00000488765 C15orf59Q2T9L4 293 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-229ENST00000488765 AGKQ53H12 422 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 CCDC81Q6ZN84 652 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 ILKAPQ9H0C8 392 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-229ENST00000488765 ING2Q9H160 280 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 TOR3AQ9H497 397 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 EVLQ9UI08 416 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-229ENST00000488765 HMGCRP04035 888 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 FSHRP23945 695 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 TRPC1P48995 793 aa16.38■□□□□ 0.21
MCF2L-229ENST00000488765 RARRES1P49788 294 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms