RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SCN4BQ8IWT1 228 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 BICD2Q8TD16 824 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 SLC25A28Q96A46 364 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 VCPIP1Q96JH7 1222 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 PYM1Q9BRP8 204 aaKnown RBP4.71□□□□□ -1.66
ITGB1-214ENST00000488427 FAM234AQ9H0X4 552 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 AAMDCQ9H7C9 122 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 CHODLQ9H9P2 273 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 PNRC2Q9NPJ4 139 aaKnown RBP4.71□□□□□ -1.66
ITGB1-214ENST00000488427 COG5Q9UP83 839 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 LZTS1Q9Y250 596 aa4.71□□□□□ -1.66
ITGB1-214ENST00000488427 FAM90A20PA6NIJ5 464 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 ZNF814B7Z6K7 855 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 NEURL1O76050 574 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 CRYABP02511 175 aaKnown RBP4.7□□□□□ -1.66
ITGB1-214ENST00000488427 MMP3P08254 477 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 ITGB6P18564 788 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 HALP42357 657 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 PPM1FP49593 454 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-214ENST00000488427 PGGT1BP53609 377 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 PRKAA2P54646 552 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 TBL3Q12788 808 aaKnown RBP4.7□□□□□ -1.66
ITGB1-214ENST00000488427 CUL4BQ13620 913 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 PTGR1Q14914 329 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 TUBB8Q3ZCM7 444 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 ZNF260Q3ZCT1 412 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 VPS52Q8N1B4 723 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 TMEM199Q8N511 208 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 EXD3Q8N9H8 876 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 CEP70Q8NHQ1 597 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 WIPF2Q8TF74 440 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-214ENST00000488427 TMEM174Q8WUU8 243 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 TBC1D20Q96BZ9 403 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 SYT17Q9BSW7 474 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 NPLQ9BXD5 320 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-214ENST00000488427 PPCSQ9HAB8 311 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 PLEKHA2Q9HB19 425 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 SLC22A11Q9NSA0 550 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 THAP1Q9NVV9 213 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 KLQ9UEF7 1012 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 NCOA3Q9Y6Q9 1424 aa4.7□□□□□ -1.66
ITGB1-214ENST00000488427 ARHGAP35Q9NRY4 1499 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 CDC42BPAQ5VT25 1732 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 NPIPB13A6NJU9 1138 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 NPIPB5A8MRT5 1133 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 NPIPB4C9JG80 1138 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 SPTLC2O15270 562 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 RNMTO43148 476 aaKnown RBP4.69□□□□□ -1.66
ITGB1-214ENST00000488427 TMCC1O94876 653 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 PEPDP12955 493 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 PRKCHP24723 683 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 KLRC2P26717 231 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 YWHAQP27348 245 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 CLCNKBP51801 687 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 BIRC3Q13489 604 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 TAF12Q16514 161 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 MTFR2Q6P444 385 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 PARM1Q6UWI2 310 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-214ENST00000488427 MOGAT3Q86VF5 341 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 TMC8Q8IU68 726 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 BRSK2Q8IWQ3 736 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 ZDHHC23Q8IYP9 409 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 ZNF548Q8NEK5 533 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-214ENST00000488427 FAM110DQ8TAY7 271 aaPredicted RBP4.69□□□□□ -1.66
ITGB1-214ENST00000488427 EME1Q96AY2 570 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 RBM17Q96I25 401 aaKnown RBP4.69□□□□□ -1.66
ITGB1-214ENST00000488427 SF3B5Q9BWJ5 86 aaKnown RBP4.69□□□□□ -1.66
ITGB1-214ENST00000488427 HIPK3Q9H422 1215 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 SPAG4Q9NPE6 437 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 TMEM248Q9NWD8 314 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 HIF1ANQ9NWT6 349 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 TBC1D14Q9P2M4 693 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 FBXO4Q9UKT5 387 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 GDAQ9Y2T3 454 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 CROCC2H7BZ55 1655 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 TET3O43151 1660 aa4.69□□□□□ -1.66
ITGB1-214ENST00000488427 SPAG9O60271 1321 aaKnown RBP4.69□□□□□ -1.66
ITGB1-214ENST00000488427 GOLGB1Q14789 3259 aaKnown RBP4.68□□□□□ -1.66
ITGB1-214ENST00000488427 TMEM272A0A1B0GTI8 110 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 INSIG1O15503 277 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 EPN2O95208 641 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 SNHG28P0DPA3 235 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 RXRAP19793 462 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 TYK2P29597 1187 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 POLD2P49005 469 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 RASSF2P50749 326 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 KRTAP10-9P60411 292 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 ENTPD8Q5MY95 495 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 Q5PR19 223 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 CBWD5Q5RIA9 395 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 GORABQ5T7V8 394 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 OTUD1Q5VV17 481 aaPredicted RBP4.68□□□□□ -1.66
ITGB1-214ENST00000488427 NAA35Q5VZE5 725 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 AWAT2Q6E213 333 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 HMBOX1Q6NT76 420 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 KIAA1324Q6UXG2 1013 aaKnown RBP4.68□□□□□ -1.66
ITGB1-214ENST00000488427 ZNF354CQ86Y25 554 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 PALB2Q86YC2 1186 aa4.68□□□□□ -1.66
ITGB1-214ENST00000488427 CSGALNACT1Q8TDX6 532 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms