RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 RALYQ9UKM9 306 aaKnown RBP23.04■■□□□ 1.28
PTPN4-211ENST00000488279 FCF1Q9Y324 198 aaKnown RBP23.04■■□□□ 1.28
PTPN4-211ENST00000488279 NYNRINQ9P2P1 1898 aaKnown RBP23.04■■□□□ 1.28
PTPN4-211ENST00000488279 LAMA5O15230 3695 aa23.04■■□□□ 1.28
PTPN4-211ENST00000488279 SIGLEC16A6NMB1 481 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 LRIG2O94898 1065 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 HNRNPA2B1P22626 353 aaKnown RBP23.03■■□□□ 1.28
PTPN4-211ENST00000488279 ITGB7P26010 798 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 CCNHP51946 323 aaPredicted RBP23.03■■□□□ 1.28
PTPN4-211ENST00000488279 NEK3P51956 506 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 SFMBT2Q5VUG0 894 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 FBXL19Q6PCT2 694 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 WDR59Q6PJI9 974 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 TMPRSS12Q86WS5 348 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 MARCH9Q86YJ5 346 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 PLPP6Q8IY26 295 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 CCDC185Q8N715 623 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 NTAN1Q96AB6 310 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 TBC1D31Q96DN5 1066 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 AGPAT1Q99943 283 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 MYOCQ99972 504 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 MAGEB5Q9BZ81 275 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 MAGEH1Q9H213 219 aa23.03■■□□□ 1.28
PTPN4-211ENST00000488279 HECAQ9UBI9 543 aaPredicted RBP23.03■■□□□ 1.28
PTPN4-211ENST00000488279 FAM149AA5PLN7 773 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 RAMP2O60895 175 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 CD160O95971 181 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 MBD3O95983 291 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 CCDC172P0C7W6 258 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 THEGLP0DJG4 465 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 L1CAMP32004 1257 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 C1QBPQ07021 282 aaKnown RBP23.02■■□□□ 1.28
PTPN4-211ENST00000488279 DNAJC3Q13217 504 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 CCDC183Q5T5S1 534 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 SLFN11Q7Z7L1 901 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 RYBPQ8N488 228 aaPredicted RBP23.02■■□□□ 1.28
PTPN4-211ENST00000488279 MDM1Q8TC05 714 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 FEM1CQ96JP0 617 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 ZFR2Q9UPR6 939 aaKnown RBP23.02■■□□□ 1.28
PTPN4-211ENST00000488279 ACTL7AQ9Y615 435 aa23.02■■□□□ 1.28
PTPN4-211ENST00000488279 ANKRD62A6NC57 917 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 TRABD2BA6NFA1 517 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 RFPL3O75679 317 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 ADRB3P13945 408 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 RPS21P63220 83 aaKnown RBP23.01■■□□□ 1.27
PTPN4-211ENST00000488279 NCAPHQ15003 741 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 POLD3Q15054 466 aaPredicted RBP23.01■■□□□ 1.27
PTPN4-211ENST00000488279 SEL1L3Q68CR1 1132 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 DNAJC24Q6P3W2 148 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 MON1BQ7L1V2 547 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 APTXQ7Z2E3 356 aaKnown RBP23.01■■□□□ 1.27
PTPN4-211ENST00000488279 KANSL1Q7Z3B3 1105 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 FAM174AQ8TBP5 190 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 TM6SF2Q9BZW4 377 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 ZDHHC6Q9H6R6 413 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 FZD3Q9NPG1 666 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 KLHL11Q9NVR0 708 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 NBEAQ8NFP9 2946 aa23.01■■□□□ 1.27
PTPN4-211ENST00000488279 PLXNB3Q9ULL4 1909 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 SDC3O75056 442 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 ZNF143P52747 638 aaPredicted RBP23■■□□□ 1.27
PTPN4-211ENST00000488279 TMEM259Q4ZIN3 620 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 KIAA1161Q6NSJ0 714 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 SCYL2Q6P3W7 929 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 PDCD7Q8N8D1 485 aaKnown RBP23■■□□□ 1.27
PTPN4-211ENST00000488279 TSC1Q92574 1164 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 LRIG1Q96JA1 1093 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 SLC17A9Q9BYT1 436 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 NAT10Q9H0A0 1025 aaKnown RBP23■■□□□ 1.27
PTPN4-211ENST00000488279 HSD3B7Q9H2F3 369 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 DKK4Q9UBT3 224 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 NEU3Q9UQ49 428 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 FADS3Q9Y5Q0 445 aa23■■□□□ 1.27
PTPN4-211ENST00000488279 ANKRD11Q6UB99 2663 aaPredicted RBP22.99■■□□□ 1.27
PTPN4-211ENST00000488279 KDELR3O43731 214 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 AP1G1O43747 822 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 JUPP14923 745 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 FERP16591 822 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 CKMT2P17540 419 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 ACADVLP49748 655 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 CLDN2P57739 230 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 SNRPD1P62314 119 aaKnown RBP22.99■■□□□ 1.27
PTPN4-211ENST00000488279 MAPK8IP2Q13387 824 aaPredicted RBP22.99■■□□□ 1.27
PTPN4-211ENST00000488279 ILKQ13418 452 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 CAMK2BQ13554 666 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 EFHC2Q5JST6 749 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 CALN1Q9BXU9 219 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 HS3ST3A1Q9Y663 406 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 DOCK4Q8N1I0 1966 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 PKD1L2Q7Z442 2459 aa22.99■■□□□ 1.27
PTPN4-211ENST00000488279 PTPRBP23467 1997 aa22.98■■□□□ 1.27
PTPN4-211ENST00000488279 ZSCAN5CA6NGD5 496 aaPredicted RBP22.98■■□□□ 1.27
PTPN4-211ENST00000488279 POP4O95707 220 aaKnown RBP22.98■■□□□ 1.27
PTPN4-211ENST00000488279 PAK4O96013 591 aaPredicted RBP22.98■■□□□ 1.27
PTPN4-211ENST00000488279 GSRP00390 522 aa22.98■■□□□ 1.27
PTPN4-211ENST00000488279 EPHB2P29323 1055 aa22.98■■□□□ 1.27
PTPN4-211ENST00000488279 HNF1BP35680 557 aa22.98■■□□□ 1.27
PTPN4-211ENST00000488279 RPL7AP62424 266 aaKnown RBP22.98■■□□□ 1.27
PTPN4-211ENST00000488279 TYRO3Q06418 890 aa22.98■■□□□ 1.27
PTPN4-211ENST00000488279 MYLK3Q32MK0 819 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms