RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ESPL1Q14674 2120 aa8.48□□□□□ -1.05
XRN1-212ENST00000486211 RP1L1Q8IWN7 2480 aaPredicted RBP8.47□□□□□ -1.05
XRN1-212ENST00000486211 ZNF106Q9H2Y7 1883 aaKnown RBP8.47□□□□□ -1.05
XRN1-212ENST00000486211 A0A1B0GTL3 188 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 RAD51BO15315 384 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 IRAK2O43187 625 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 STX6O43752 255 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 LDLRP01130 860 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 NOS2P35228 1153 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 ASPAP45381 313 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 ATP1A2P50993 1020 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 ADKP55263 362 aaKnown RBP8.47□□□□□ -1.05
XRN1-212ENST00000486211 INCA1Q0VD86 236 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 C1orf61Q13536 156 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 RILPL1Q5EBL4 403 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 FAM46CQ5VWP2 391 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 PM20D1Q6GTS8 502 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 LYPD4Q6UWN0 246 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 SLITRK4Q8IW52 837 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 TEX19Q8NA77 164 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 KYQ8NBH2 561 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 HJURPQ8NCD3 748 aaPredicted RBP8.47□□□□□ -1.05
XRN1-212ENST00000486211 GPBAR1Q8TDU6 330 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 OR8D1Q8WZ84 308 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 NDRG1Q92597 394 aaKnown RBP8.47□□□□□ -1.05
XRN1-212ENST00000486211 SLC45A3Q96JT2 553 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 TBATAQ96M53 351 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 HEXIM2Q96MH2 286 aaKnown RBP8.47□□□□□ -1.05
XRN1-212ENST00000486211 LRRC61Q9BV99 259 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 CPEB1Q9BZB8 566 aaKnown RBP8.47□□□□□ -1.05
XRN1-212ENST00000486211 CLPBQ9H078 707 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 CDH19Q9H159 772 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 LRRN3Q9H3W5 708 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 CASS4Q9NQ75 786 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 PRDM8Q9NQV8 689 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 SPASTQ9UBP0 616 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 NAALADL1Q9UQQ1 740 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 DNMT3AQ9Y6K1 912 aaPredicted RBP8.47□□□□□ -1.05
XRN1-212ENST00000486211 DNHD1Q96M86 4753 aa8.47□□□□□ -1.05
XRN1-212ENST00000486211 RNF103O00237 685 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 YY2O15391 372 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 TGFB1I1O43294 461 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 PHACTR2O75167 634 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 CNTN5O94779 1100 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 C4BPAP04003 597 aaKnown RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 CELA2BP08218 269 aaPredicted RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 OAS2P29728 719 aaKnown RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 UGT1A3P35503 534 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 CASP4P49662 377 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 IRX6P78412 446 aaPredicted RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 CDC20Q12834 499 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 CDH18Q13634 790 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 NCOA4Q13772 614 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 PDE1CQ14123 709 aaPredicted RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 C16orf72Q14CZ0 275 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 PRRT3Q5FWE3 981 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 RNF219Q5W0B1 726 aaPredicted RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 TCTN3Q6NUS6 607 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 ESRP1Q6NXG1 681 aaKnown RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 CARNMT1Q8N4J0 409 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 ARL10Q8N8L6 244 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 CPT1CQ8TCG5 803 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 APOBEC4Q8WW27 367 aaKnown RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 CMKLR1Q99788 373 aa8.46□□□□□ -1.06
XRN1-212ENST00000486211 LLPHQ9BRT6 129 aaKnown RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 OLA1Q9NTK5 396 aaKnown RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 APOBEC3BQ9UH17 382 aaKnown RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 ERRFI1Q9UJM3 462 aaPredicted RBP8.46□□□□□ -1.06
XRN1-212ENST00000486211 MED13LQ71F56 2210 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 EFCAB7A8K855 629 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 C1QTNF3-AMACRE9PGA6 284 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 MCF2LO15068 1137 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 ALOX15BO15296 676 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 ACSL4O60488 711 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 LUC7L3O95232 432 aaKnown RBP8.45□□□□□ -1.06
XRN1-212ENST00000486211 KIF20AO95235 890 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 ZBED1O96006 694 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 IGHA1P01876 353 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 CTSLP07711 333 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 ANXA6P08133 673 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 PRKAR1AP10644 381 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 CCL4P13236 92 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 TSHRP16473 764 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 RABIFP47224 123 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 NUMBP49757 651 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 RNF144AP50876 292 aaPredicted RBP8.45□□□□□ -1.06
XRN1-212ENST00000486211 ANAPC15P60006 121 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 PFN3P60673 137 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 CLDN10P78369 228 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 EIF2S3LQ2VIR3 472 aaKnown RBP8.45□□□□□ -1.06
XRN1-212ENST00000486211 SPOPLQ6IQ16 392 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 PIGZQ86VD9 579 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 CCNJLQ8IV13 435 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 SLC34A3Q8N130 599 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 CFAP52Q8N1V2 620 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 IL22RA1Q8N6P7 574 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 RASSF8Q8NHQ8 419 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 BTN2A2Q8WVV5 523 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 EDEM1Q92611 657 aa8.45□□□□□ -1.06
XRN1-212ENST00000486211 KLF6Q99612 283 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms