RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TRIM11Q96F44 468 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 HDAC8Q9BY41 377 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 MAGEB5Q9BZ81 275 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 RAB6CQ9H0N0 254 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 CATSPERBQ9H7T0 1116 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 ERVMER34-1Q9H9K5 563 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 EBF2Q9HAK2 575 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 PREBQ9HCU5 417 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 MRPL47Q9HD33 250 aaKnown RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 TM9SF3Q9HD45 589 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 NDFIP2Q9NV92 336 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 TAS2R14Q9NYV8 317 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 SERGEFQ9UGK8 458 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 SARDHQ9UL12 918 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 HPCAL4Q9UM19 191 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 WASF3Q9UPY6 502 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 ANKRD6Q9Y2G4 727 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 LUC7L2Q9Y383 392 aaKnown RBP7.15□□□□□ -1.26
VPS50-218ENST00000485994 MFHAS1Q9Y4C4 1052 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.15□□□□□ -1.26
VPS50-218ENST00000485994 SNX10Q9Y5X0 201 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 SCINQ9Y6U3 715 aa7.15□□□□□ -1.26
VPS50-218ENST00000485994 CEP295Q9C0D2 2601 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3DA0A087WVF3 549 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3IA0A087WXS9 549 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3EA0A087X179 549 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3KA0A087X1G2 549 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3FA6NER0 549 aaPredicted RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3LB9A6J9 549 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 K7ERQ8 282 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 CBX4O00257 560 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 FGF10O15520 208 aaPredicted RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 AP1G1O43747 822 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TDRD6O60522 2096 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 MAGEC1O60732 1142 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 CBFA2T3O75081 653 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 RNF8O76064 485 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 FSBPO95073 299 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 GJB6O95452 261 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 POP4O95707 220 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 GSRP00390 522 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 SERPING1P05155 500 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 CTSLP07711 333 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3HP0C7X1 549 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 VAV1P15498 845 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 CD38P28907 300 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 EPHB2P29323 1055 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 RXRGP48443 463 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 SERPINH1P50454 418 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 NOVA1P51513 510 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 NDST2P52849 883 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 ADPRHP54922 357 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 ARF5P84085 180 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 GRIK2Q13002 908 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 SERINC3Q13530 473 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 POLD3Q15054 466 aaPredicted RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 HLA-BQ31612 363 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 UAP1L1Q3KQV9 507 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 ZSCAN23Q3MJ62 389 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 PARP15Q460N3 678 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 BOLA3Q53S33 107 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 EFHC2Q5JST6 749 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 AGBL4Q5VU57 503 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 E4F1Q66K89 784 aaPredicted RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3GQ6DHY5 549 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3CQ6IPX1 549 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 PSAPL1Q6NUJ1 521 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 C22orf39Q6P5X5 142 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 DPY19L3Q6ZPD9 716 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 Q6ZVU0 165 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TMC6Q7Z403 805 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TFAP2DQ7Z6R9 452 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 PHLDB2Q86SQ0 1253 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 PRPF39Q86UA1 669 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 VPS36Q86VN1 386 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TBC1D3Q8IZP1 549 aaPredicted RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 ZCCHC9Q8N567 271 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 CCDC185Q8N715 623 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 RTL3Q8N8U3 475 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 OR7D4Q8NG98 312 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 OR14C36Q8NHC7 312 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 GANCQ8TET4 914 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 ASB12Q8WXK4 309 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 RAB7BQ96AH8 199 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 VOPP1Q96AW1 172 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 PPP1R16AQ96I34 528 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 MCEEQ96PE7 176 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 ATXN2Q99700 1313 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 HEPHQ9BQS7 1158 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 SPON2Q9BUD6 331 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 PRR14Q9BWN1 585 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 GTPBP2Q9BX10 602 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 CPEB1Q9BZB8 566 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 MIR1-1HGQ9H1L0 117 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 NOL6Q9H6R4 1146 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 GAREM1Q9H706 876 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 ATP13A1Q9HD20 1204 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 TM7SF3Q9NS93 570 aa7.14□□□□□ -1.27
VPS50-218ENST00000485994 SEPT11Q9NVA2 429 aaKnown RBP7.14□□□□□ -1.27
VPS50-218ENST00000485994 TOR4AQ9NXH8 423 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms