RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 GRK5P34947 590 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 P2RX3P56373 397 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TAS2R50P59544 299 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TLE3Q04726 772 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TRPC3Q13507 836 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 CUL4BQ13620 913 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 SLC12A1Q13621 1099 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 ERV3-1Q14264 604 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 GALNT3Q14435 633 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 BTBD16Q32M84 506 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 KIAA1755Q5JYT7 1200 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TTC39AQ5SRH9 613 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 INTS11Q5TA45 600 aaKnown RBP4.07□□□□□ -1.76
GTF3A-207ENST00000482655 RRAGAQ7L523 313 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 MAATS1Q7Z4T9 603 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TRABD2AQ86V40 505 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 PAQR4Q8N4S7 273 aaPredicted RBP4.07□□□□□ -1.76
GTF3A-207ENST00000482655 SCAMP5Q8TAC9 235 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TMEM174Q8WUU8 243 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 HMGB4Q8WW32 186 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 ASB5Q8WWX0 329 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TMEM204Q9BSN7 226 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 SF3B5Q9BWJ5 86 aaKnown RBP4.07□□□□□ -1.76
GTF3A-207ENST00000482655 CCDC134Q9H6E4 229 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 NOD2Q9HC29 1040 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 LIN7CQ9NUP9 197 aaKnown RBP4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TMLHEQ9NVH6 421 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 FEM1BQ9UK73 627 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 DAPP1Q9UN19 280 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 TNFSF13BQ9Y275 285 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 CRYL1Q9Y2S2 319 aa4.07□□□□□ -1.76
GTF3A-207ENST00000482655 MYOM2P54296 1465 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 A0A1B0GVC2 190 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 J3KRW8 73 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 MSI1O43347 362 aaKnown RBP4.06□□□□□ -1.76
GTF3A-207ENST00000482655 KRT38O76015 456 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 KAT7O95251 611 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 ALDOCP09972 364 aaKnown RBP4.06□□□□□ -1.76
GTF3A-207ENST00000482655 SERPINA4P29622 427 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 KRT9P35527 623 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 RBM5P52756 815 aaKnown RBP eCLIP4.06□□□□□ -1.76
GTF3A-207ENST00000482655 PNLIPRP1P54315 467 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 PRKAA2P54646 552 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 SHC2P98077 582 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 TLE2Q04725 743 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 UBE3AQ05086 875 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 RNASELQ05823 741 aaKnown RBP4.06□□□□□ -1.76
GTF3A-207ENST00000482655 ANKRD1Q15327 319 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 TBRG1Q3YBR2 411 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 TRIM60Q495X7 471 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 C10orf76Q5T2E6 689 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 TMED8Q6PL24 325 aaPredicted RBP4.06□□□□□ -1.76
GTF3A-207ENST00000482655 RSRC2Q7L4I2 434 aaKnown RBP4.06□□□□□ -1.76
GTF3A-207ENST00000482655 ADGRF3Q8IZF5 1079 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 ESX1Q8N693 406 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 OR1N1Q8NGS0 311 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 CEP70Q8NHQ1 597 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 SKA1Q96BD8 255 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 COG8Q96MW5 612 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 ZPBPQ9BS86 351 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 SLC26A6Q9BXS9 759 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 WASH6PQ9NQA3 447 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 CNTN6Q9UQ52 1028 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 RRP7AQ9Y3A4 280 aaKnown RBP4.06□□□□□ -1.76
GTF3A-207ENST00000482655 MARF1Q9Y4F3 1742 aaKnown RBP4.06□□□□□ -1.76
GTF3A-207ENST00000482655 CAMTA1Q9Y6Y1 1673 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 UNC13BO14795 1591 aa4.06□□□□□ -1.76
GTF3A-207ENST00000482655 DUOX2Q9NRD8 1548 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 RIMS2Q9UQ26 1411 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 MTUS2Q5JR59 1369 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 CACNA1IQ9P0X4 2223 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TBC1D3DA0A087WVF3 549 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TBC1D3IA0A087WXS9 549 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TBC1D3EA0A087X179 549 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TBC1D3KA0A087X1G2 549 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 LOC105369274A0A096LPK9 316 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 LOC102723532A0A0G2JNH3 316 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TBC1D3BA6NDS4 549 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TBC1D3FA6NER0 549 aaPredicted RBP4.05□□□□□ -1.76
GTF3A-207ENST00000482655 KIF28PB7ZC32 967 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 B9A039 149 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TBC1D3LB9A6J9 549 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 E7EVH7 732 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 SEPT4O43236 478 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 EIF5BO60841 1220 aaKnown RBP4.05□□□□□ -1.76
GTF3A-207ENST00000482655 RPP40O75818 363 aaKnown RBP4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TFRCP02786 760 aaKnown RBP4.05□□□□□ -1.76
GTF3A-207ENST00000482655 WNT1P04628 370 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 POLBP06746 335 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TBC1D3HP0C7X1 549 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 TGFB3P10600 412 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 CKMT1AP12532 417 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 ELF1P32519 619 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 CASP2P42575 452 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 CDK7P50613 346 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 GEMIN4P57678 1058 aaKnown RBP4.05□□□□□ -1.76
GTF3A-207ENST00000482655 VAMP2P63027 116 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 PMPCAQ10713 525 aa4.05□□□□□ -1.76
GTF3A-207ENST00000482655 SF3A3Q12874 501 aaKnown RBP eCLIP4.05□□□□□ -1.76
GTF3A-207ENST00000482655 G3BP1Q13283 466 aaKnown RBP eCLIP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms