RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 CXCL16Q9H2A7 254 aa10.3□□□□□ -0.76
COMMD4-203ENST00000480484 FBRSQ9HAH7 460 aa10.3□□□□□ -0.76
COMMD4-203ENST00000480484 TBCCD1Q9NVR7 557 aa10.3□□□□□ -0.76
COMMD4-203ENST00000480484 EBF1Q9UH73 591 aa10.3□□□□□ -0.76
COMMD4-203ENST00000480484 DNAH14Q0VDD8 3507 aa10.3□□□□□ -0.76
COMMD4-203ENST00000480484 K7ERI5 159 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 HCRTO43612 131 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 HSPA4LO95757 839 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 P4HA1P13674 534 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 SEPHS1P49903 392 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 NDST2P52849 883 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 CAPSQ13938 189 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 COL9A2Q14055 689 aaPredicted RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 ADRM1Q16186 407 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 LY6KQ17RY6 165 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 BSPRYQ5W0U4 402 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 BORAQ6PGQ7 559 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 CATSPER4Q7RTX7 472 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 CAND1Q86VP6 1230 aaKnown RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 THNSL1Q8IYQ7 743 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 DSELQ8IZU8 1212 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 TNS4Q8IZW8 715 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 CARNMT1Q8N4J0 409 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 PNPLA1Q8N8W4 532 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 SNX31Q8N9S9 440 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 UBA3Q8TBC4 463 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 ATP2A3Q93084 1043 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 SORT1Q99523 831 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 RTKNQ9BST9 563 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 DHX33Q9H6R0 707 aaKnown RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 WDR55Q9H6Y2 383 aaPredicted RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 TBC1D23Q9NUY8 699 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 HES2Q9Y543 173 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 POLR2AP24928 1970 aaKnown RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 TCRBV5S1A1TA0A578 114 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 SLC15A5A6NIM6 579 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 CHADO15335 359 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 GSRP00390 522 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 RALBP11234 206 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 ZNF23P17027 643 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 PRKCHP24723 683 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 RBL1P28749 1068 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 OAZ1P54368 228 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 GSTM4Q03013 218 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 RELAQ04206 551 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 BTG3Q14201 252 aaPredicted RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 PCLAFQ15004 111 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 STXBP2Q15833 593 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 CA9Q16790 459 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 KYQ8NBH2 561 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 THAP11Q96EK4 314 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 TMA16Q96EY4 203 aaKnown RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 OR52B2Q96RD2 323 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 GCOM2Q9BZD3 368 aaPredicted RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.29□□□□□ -0.763e-10■■■■■ 33.7
COMMD4-203ENST00000480484 EMCNQ9ULC0 261 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 RNF11Q9Y3C5 154 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 CCDC78A2IDD5 438 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 SOWAHBA6NEL2 793 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 FBP2O00757 339 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 PLIN3O60664 434 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 CBFA2T3O75081 653 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 ZBED1O96006 694 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 OCM2P0CE71 109 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 OCMP0CE72 109 aaPredicted RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 ACAT1P24752 427 aaKnown RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 MIPP30301 263 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 HSPA13P48723 471 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 NUP107P57740 925 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 ABCE1P61221 599 aaKnown RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 PHEXP78562 749 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 VGLL4Q14135 290 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 LRRC71Q8N4P6 559 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 ZNF781Q8N8C0 355 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 KBTBD7Q8WVZ9 684 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 RCN3Q96D15 328 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 MARK4Q96L34 752 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 CORO1BQ9BR76 489 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 KLC2Q9H0B6 622 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 TRPV6Q9H1D0 765 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 STN1Q9H668 368 aaKnown RBP10.29□□□□□ -0.76
COMMD4-203ENST00000480484 PNPLA8Q9NP80 782 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 TMPRSS4Q9NRS4 437 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 DNAJC28Q9NX36 388 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 ITM2BQ9Y287 266 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 PSAT1Q9Y617 370 aa10.29□□□□□ -0.76
COMMD4-203ENST00000480484 TRDMT1O14717 391 aaKnown RBP10.28□□□□□ -0.76
COMMD4-203ENST00000480484 ERBB2P04626 1255 aa10.28□□□□□ -0.76
COMMD4-203ENST00000480484 PGK2P07205 417 aa10.28□□□□□ -0.76
COMMD4-203ENST00000480484 TBXAS1P24557 533 aaPredicted RBP10.28□□□□□ -0.76
COMMD4-203ENST00000480484 HOXD12P35452 270 aa10.28□□□□□ -0.76
COMMD4-203ENST00000480484 TCF7P36402 384 aaPredicted RBP10.28□□□□□ -0.76
COMMD4-203ENST00000480484 ARL2P36404 184 aa10.28□□□□□ -0.76
COMMD4-203ENST00000480484 OGFOD2Q6N063 350 aa10.28□□□□□ -0.76
COMMD4-203ENST00000480484 CCBE1Q6UXH8 406 aaPredicted RBP10.28□□□□□ -0.76
COMMD4-203ENST00000480484 PDCD6IPQ8WUM4 868 aaKnown RBP10.28□□□□□ -0.76
COMMD4-203ENST00000480484 TRAPPC12Q8WVT3 735 aa10.28□□□□□ -0.76
COMMD4-203ENST00000480484 RMND5BQ96G75 393 aaPredicted RBP10.28□□□□□ -0.76
COMMD4-203ENST00000480484 SLC4A5Q9BY07 1137 aa10.28□□□□□ -0.76
COMMD4-203ENST00000480484 FRMD8P1Q9BZ68 369 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms