RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 GKP32189 559 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 SLC8A1P32418 973 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CCNHP51946 323 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 RHOAP61586 193 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CCZ1BP86790 482 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CCZ1P86791 482 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CREB5Q02930 508 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 SLC20A2Q08357 652 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CCDC6Q16204 474 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 AFMIDQ63HM1 303 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PMS2CLQ68D20 193 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 NCBP2-AS2Q69YL0 99 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 LAIR1Q6GTX8 287 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 LPCAT2Q7L5N7 544 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 ALYREFQ86V81 257 aaKnown RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 C11orf74Q86VG3 221 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 RFX6Q8HWS3 928 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 AADATQ8N5Z0 425 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 LZTR1Q8N653 840 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 PIP4K2CQ8TBX8 421 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 FAM71BQ8TC56 605 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 LRRN4Q8WUT4 740 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 SNX19Q92543 992 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 KRT35Q92764 455 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 GPR174Q9BXC1 333 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 CEP44Q9C0F1 390 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 FBXL12Q9NXK8 326 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 DDX56Q9NY93 547 aaKnown RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 HECAQ9UBI9 543 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 IL36AQ9UHA7 158 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 IPO11Q9UI26 975 aaKnown RBP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 GUCA1BQ9UMX6 200 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 NCKAP1Q9Y2A7 1128 aa7.02□□□□□ -1.29
BRCA1-215ENST00000478531 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.02□□□□□ -1.29
BRCA1-215ENST00000478531 TRPM6Q9BX84 2022 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 C3orf70A6NLC5 250 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-215ENST00000478531 MEI4A8MW99 385 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 KRIT1O00522 736 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 MCF2LO15068 1137 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 ALOX15BO15296 676 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 LEFTY1O75610 366 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 PALMO75781 387 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 FTCDO95954 541 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 CHRNA3P32297 505 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 ACSL1P33121 698 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 PTGER3P43115 390 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 SNRPD1P62314 119 aaKnown RBP7.01□□□□□ -1.29
BRCA1-215ENST00000478531 GBE1Q04446 702 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 ZBTB16Q05516 673 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 IFI16Q16666 785 aaKnown RBP7.01□□□□□ -1.29
BRCA1-215ENST00000478531 CARD16Q5EG05 197 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 ARSIQ5FYB1 569 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 LRRC38Q5VT99 294 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 FAM46CQ5VWP2 391 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 KAZNQ674X7 775 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 MFSD7Q6UXD7 560 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 SLC36A4Q6YBV0 504 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 CYP2U1Q7Z449 544 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 HDDC3Q8N4P3 179 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 DCLK2Q8N568 766 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 PQLC3Q8N755 202 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 OR2AP1Q8NGE2 309 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 KIAA1524Q8TCG1 905 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 FAF2Q96CS3 445 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 HSPA12BQ96MM6 686 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 GDAP1L1Q96MZ0 367 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 CINPQ9BW66 212 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-215ENST00000478531 MAK16Q9BXY0 300 aaKnown RBP7.01□□□□□ -1.29
BRCA1-215ENST00000478531 TSGA10Q9BZW7 698 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 BTBD1Q9H0C5 482 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 SMOC1Q9H4F8 434 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 PDFQ9HBH1 243 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 LZTFL1Q9NQ48 299 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 ITM2CQ9NQX7 267 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 DYRK4Q9NR20 520 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 WSB2Q9NYS7 404 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-215ENST00000478531 PACSIN2Q9UNF0 486 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-215ENST00000478531 HEY1Q9Y5J3 304 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 CAPN6Q9Y6Q1 641 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 BPTFQ12830 3046 aa7.01□□□□□ -1.29
BRCA1-215ENST00000478531 RNF103O00237 685 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 APOL1O14791 398 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 KRT86O43790 486 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 SEMA4FO95754 770 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 IGSF6O95976 241 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 GSRP00390 522 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 PRNPP04156 253 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 UGT2B4P06133 528 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 CCDC175P0C221 793 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 C5AR1P21730 350 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 ITPKAP23677 461 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 OXTRP30559 389 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 DRD3P35462 400 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 IL10RBQ08334 325 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 SPEM2Q0P670 501 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 CNTN1Q12860 1018 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 ZNF235Q14590 738 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 LYSMD4Q5XG99 296 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 NPNTQ6UXI9 565 aa7□□□□□ -1.29
BRCA1-215ENST00000478531 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms