RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ECT2LQ008S8 904 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 GCNT1Q02742 428 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 OVGP1Q12889 678 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 LRMPQ12912 555 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 ILKQ13418 452 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 CST6Q15828 149 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 CBWD6Q4V339 395 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 ZC3H12AQ5D1E8 599 aaKnown RBP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 CBWD3Q5JTY5 395 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 CBWD5Q5RIA9 395 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 TMEM215Q68D42 235 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 ANKRD40Q6AI12 368 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 FOXR2Q6PJQ5 311 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 ELOA2Q8IYF1 753 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 AGGF1Q8N302 714 aaeCLIP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 BAHD1Q8TBE0 780 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 SLC35F5Q8WV83 523 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 BTN2A3PQ96KV6 586 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 ST7Q9NRC1 585 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 SLC25A13Q9UJS0 675 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.49□□□□□ -1.21
BRCA1-214ENST00000477152 ERVW-1Q9UQF0 538 aa7.49□□□□□ -1.21
BRCA1-214ENST00000477152 COL5A1P20908 1838 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 A0A1B0GTQ1 180 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 C1QTNF3-AMACRE9PGA6 284 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TAF4O00268 1085 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 RRP8O43159 456 aaKnown RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 JUPP14923 745 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 GOT1P17174 413 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 SLC8A1P32418 973 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 CSKP41240 450 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 CTSKP43235 329 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 RGS7P49802 495 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 PNOCQ13519 176 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 PKP1Q13835 747 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 COL9A2Q14055 689 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 MS4A13Q5J8X5 152 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 ACBD5Q5T8D3 534 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 SLCO6A1Q86UG4 719 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 ZC3H3Q8IXZ2 948 aaKnown RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 OR8D1Q8WZ84 308 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 SLC35C1Q96A29 364 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 ELF4Q99607 663 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 MIS12Q9H081 205 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TNKS2Q9H2K2 1166 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 ERVMER34-1Q9H9K5 563 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 IL21RQ9HBE5 538 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 POPDC2Q9HBU9 364 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 CLEC4EQ9ULY5 219 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 DMTF1Q9Y222 760 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 PAXBP1Q9Y5B6 917 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TP53BP1Q12888 1972 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TMEM131Q92545 1883 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3DA0A087WVF3 549 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3IA0A087WXS9 549 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3EA0A087X179 549 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3KA0A087X1G2 549 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3FA6NER0 549 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3LB9A6J9 549 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 MSI1O43347 362 aaKnown RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 RNGTTO60942 597 aaKnown RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 RFPL3O75679 317 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 ALX3O95076 343 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 HTR3BO95264 441 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 GLI1P08151 1106 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 ATXN1LP0C7T5 689 aaKnown RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3HP0C7X1 549 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 KRT5P13647 590 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 ZNF18P17022 549 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 CD70P32970 193 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 GALCP54803 685 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 CDK17Q00537 523 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 ELAVL3Q14576 367 aaKnown RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 SMAD1Q15797 465 aaKnown RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 PITRM1Q5JRX3 1037 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3GQ6DHY5 549 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3CQ6IPX1 549 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 PMF1Q6P1K2 205 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 RFWD3Q6PCD5 774 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 BHLHA9Q7RTU4 235 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 IQCHQ86VS3 1027 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 CHSY1Q86X52 802 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 DHX40Q8IX18 779 aaKnown RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 SMYD4Q8IYR2 804 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 TBC1D3Q8IZP1 549 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 OR14C36Q8NHC7 312 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 NDRG1Q92597 394 aaKnown RBP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 EEF2KMTQ96G04 330 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 SPAG5Q96R06 1193 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 THAP9Q9H5L6 903 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 RAD18Q9NS91 495 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 HIF3AQ9Y2N7 669 aa7.48□□□□□ -1.21
BRCA1-214ENST00000477152 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.48□□□□□ -1.21
BRCA1-214ENST00000477152 PLXNB3Q9ULL4 1909 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 ITIH6Q6UXX5 1313 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 MUC22E2RYF6 1773 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-214ENST00000477152 TRABD2BA6NFA1 517 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 CAPN8A6NHC0 703 aa7.47□□□□□ -1.21
BRCA1-214ENST00000477152 H0Y8X5 98 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms