RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 LINGO4Q6UY18 593 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 RANBP10Q6VN20 620 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 ZNF783Q6ZMS7 281 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 KDELC2Q7Z4H8 507 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 UNC5BQ8IZJ1 945 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 IPMKQ8NFU5 416 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 CDCA3Q99618 268 aaPredicted RBP14.68□□□□□ -0.06
COL4A6-206ENST00000477085 PRO3102Q9H379 93 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 ACSS3Q9H6R3 686 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 SFXN1Q9H9B4 322 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 SMYD2Q9NRG4 433 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 GOLGA6AQ9NYA3 693 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 HELZP42694 1942 aaKnown RBP14.68□□□□□ -0.06
COL4A6-206ENST00000477085 GOLGA6L10A6NI86 522 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 CXorf49A8MYA2 514 aaPredicted RBP14.68□□□□□ -0.06
COL4A6-206ENST00000477085 ANXA9O76027 345 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 CPP00450 1065 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 WNT3AP56704 352 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 USP4Q13107 963 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 ASTLQ6HA08 431 aaPredicted RBP14.68□□□□□ -0.06
COL4A6-206ENST00000477085 SYCE2Q6PIF2 218 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 CES3Q6UWW8 571 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 TMEM184AQ6ZMB5 413 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 MFN1Q8IWA4 741 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 STAMBPL1Q96FJ0 436 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 FCRL3Q96P31 734 aaPredicted RBP14.68□□□□□ -0.06
COL4A6-206ENST00000477085 TBL1YQ9BQ87 522 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 DHRS4Q9BTZ2 278 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 FICDQ9BVA6 458 aa14.68□□□□□ -0.06
COL4A6-206ENST00000477085 INTS6Q9UL03 887 aaKnown RBP14.68□□□□□ -0.06
COL4A6-206ENST00000477085 SPTBN5Q9NRC6 3674 aaKnown RBP14.67□□□□□ -0.06
COL4A6-206ENST00000477085 EXOC1LA0A1B0GW35 172 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 HMGB1P1B2RPK0 211 aaPredicted RBP14.67□□□□□ -0.06
COL4A6-206ENST00000477085 POC1B-GALNT4F8VUJ3 575 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 PSMD3O43242 534 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 MT-CO1P00395 513 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 TCF3P15923 654 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 CD70P32970 193 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 CHRNA4P43681 627 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 GEMP55040 296 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 MAGOHP61326 146 aaKnown RBP14.67□□□□□ -0.06
COL4A6-206ENST00000477085 LMAN2Q12907 356 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 CDH18Q13634 790 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 KBTBD12Q3ZCT8 623 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 STEAP4Q687X5 459 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 ADGRG2Q8IZP9 1017 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 DNAAF3Q8N9W5 541 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 ST13P5Q8NFI4 369 aaPredicted RBP14.67□□□□□ -0.06
COL4A6-206ENST00000477085 FIBINQ8TAL6 211 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 NSMCE1Q8WV22 266 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 MRRFQ96E11 262 aaKnown RBP14.67□□□□□ -0.06
COL4A6-206ENST00000477085 PSKH2Q96QS6 385 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 SEMA3CQ99985 751 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 MGME1Q9BQP7 344 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 UBA2Q9UBT2 640 aaPredicted RBP14.67□□□□□ -0.06
COL4A6-206ENST00000477085 TBK1Q9UHD2 729 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 LGALS13Q9UHV8 139 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 WNT6Q9Y6F9 365 aa14.67□□□□□ -0.06
COL4A6-206ENST00000477085 RGS16O15492 202 aaPredicted RBP14.66□□□□□ -0.06
COL4A6-206ENST00000477085 NEBLO76041 1014 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 PENKP01210 267 aaPredicted RBP14.66□□□□□ -0.06
COL4A6-206ENST00000477085 PRKCHP24723 683 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 PHBP35232 272 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 VIPR2P41587 438 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 MPP3Q13368 585 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 MSLNQ13421 630 aaPredicted RBP14.66□□□□□ -0.06
COL4A6-206ENST00000477085 PCSK7Q16549 785 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 FAM78AQ5JUQ0 283 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 ALG1LQ6GMV1 187 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 NAPEPLDQ6IQ20 393 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 ELMSAN1Q6PJG2 1045 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 GPR149Q86SP6 731 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 TDRPQ86YL5 185 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 NPAS3Q8IXF0 933 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 MOCS1Q9NZB8 636 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 VPS51Q9UID3 782 aa14.66□□□□□ -0.06
COL4A6-206ENST00000477085 TYW5A2RUC4 315 aaKnown RBP14.65□□□□□ -0.06
COL4A6-206ENST00000477085 K7ERQ8 282 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 ATP9BO43861 1147 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 CREB1P16220 341 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 CR2P20023 1033 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 HLA-FP30511 346 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 NPY2RP49146 381 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 GEMIN4P57678 1058 aaKnown RBP14.65□□□□□ -0.06
COL4A6-206ENST00000477085 PPARDQ03181 441 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 CDH17Q12864 832 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 ZNF235Q14590 738 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 C2orf16Q68DN1 1984 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 CASC4Q6P4E1 433 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 EXOC3L1Q86VI1 746 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 RNF135Q8IUD6 432 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 GSDMBQ8TAX9 411 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 DCAKDQ8WVC6 231 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 FGF13Q92913 245 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 IRF7Q92985 503 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 EXOC2Q96KP1 924 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 ZNF778Q96MU6 729 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 CCDC77Q9BR77 488 aa14.65□□□□□ -0.06
COL4A6-206ENST00000477085 POLR1EQ9GZS1 481 aaKnown RBP14.65□□□□□ -0.06
COL4A6-206ENST00000477085 NSUN3Q9H649 340 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms