RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SESTD1Q86VW0 696 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 CCDC150Q8NCX0 1101 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 OR1N1Q8NGS0 311 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 FAM222BQ8WU58 562 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 IQCDQ96DY2 449 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 HOOK2Q96ED9 719 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 LRGUKQ96M69 825 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 DDX23Q9BUQ8 820 aaKnown RBP2.01□□□□□ -2.09
CCDC39-203ENST00000473854 PCGF6Q9BYE7 350 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 HOMER2Q9NSB8 354 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 ABCF3Q9NUQ8 709 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 FAM120CQ9NX05 1096 aaKnown RBP2.01□□□□□ -2.09
CCDC39-203ENST00000473854 TP53TG3Q9ULZ0 132 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 ITSN2Q9NZM3 1697 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 KIF14Q15058 1648 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 RAPGEF6Q8TEU7 1601 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 UGGT2Q9NYU1 1516 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 AQRO60306 1485 aaKnown RBP eCLIP2.01□□□□□ -2.09
CCDC39-203ENST00000473854 COL5A2P05997 1499 aaPredicted RBP2.01□□□□□ -2.09
CCDC39-203ENST00000473854 ERCC6Q03468 1493 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 GRIN2AQ12879 1464 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 GRIN2BQ13224 1484 aa2.01□□□□□ -2.09
CCDC39-203ENST00000473854 GREB1LQ9C091 1923 aaPredicted RBP2□□□□□ -2.09
CCDC39-203ENST00000473854 CYP3A7-CYP3A51PA0A087WV96 503 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 E2F8A0AVK6 867 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 CLCA1A8K7I4 914 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 PMS2P5A8MQ11 134 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 RASA4BC9J798 803 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 AREL1O15033 823 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 CTNND1O60716 968 aaKnown RBP2□□□□□ -2.09
CCDC39-203ENST00000473854 DNAH10OSP0CZ25 163 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 MYBP10242 640 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 SRCP12931 536 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 CYP3A7P24462 503 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 RFC1P35251 1148 aaPredicted RBP2□□□□□ -2.09
CCDC39-203ENST00000473854 CLCN3P51790 818 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 CLCNKBP51801 687 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 NEK2P51955 445 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 SLC8A3P57103 927 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 TAS2R50P59544 299 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 IRX1P78414 480 aaPredicted RBP2□□□□□ -2.09
CCDC39-203ENST00000473854 ZBTB17Q13105 803 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 TTF1Q15361 905 aaPredicted RBP2□□□□□ -2.09
CCDC39-203ENST00000473854 DCAF6Q58WW2 860 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 CCDC28AQ8IWP9 274 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 SRBD1Q8N5C6 995 aaKnown RBP2□□□□□ -2.09
CCDC39-203ENST00000473854 KBTBD3Q8NAB2 608 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 LRTOMTQ8WZ04 291 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 TMEM18Q96B42 140 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 MAGEB5Q9BZ81 275 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 FAM204AQ9H8W3 233 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 PCDH12Q9NPG4 1184 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 ZNF224Q9NZL3 707 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 KCNK7Q9Y2U2 307 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 COL4A3BPQ9Y5P4 624 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 ATRXP46100 2492 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 ARHGEF11O15085 1522 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 MAP3K1Q13233 1512 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 CDK13Q14004 1512 aaKnown RBP2□□□□□ -2.09
CCDC39-203ENST00000473854 EHBP1L1Q8N3D4 1523 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 DISP1Q96F81 1524 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 MAGI1Q96QZ7 1491 aaPredicted RBP2□□□□□ -2.09
CCDC39-203ENST00000473854 CDC42BPBQ9Y5S2 1711 aa2□□□□□ -2.09
CCDC39-203ENST00000473854 CARMIL1Q5VZK9 1371 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 TDRD9Q8NDG6 1382 aaKnown RBP1.99□□□□□ -2.09
CCDC39-203ENST00000473854 PTPN23Q9H3S7 1636 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 ABCA8O94911 1581 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 ERCC6L2Q5T890 1561 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 A0A0J9YWU9 116 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP1.99□□□□□ -2.09
CCDC39-203ENST00000473854 MEIOCA2RUB1 952 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 MBD3L5A6NJ08 208 aaPredicted RBP1.99□□□□□ -2.09
CCDC39-203ENST00000473854 PCDH7O60245 1069 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 CLDN7O95471 211 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 CD53P19397 219 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 PRKCHP24723 683 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 SLC5A9Q2M3M2 681 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 ARHGAP17Q68EM7 881 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 MSANTD2Q6P1R3 559 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 SERPINA11Q86U17 422 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 RBFAQ8N0V3 343 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 ZNF441Q8N8Z8 693 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 FIG4Q92562 907 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 ZNF689Q96CS4 500 aaPredicted RBP1.99□□□□□ -2.09
CCDC39-203ENST00000473854 FRG2BQ96QU4 278 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 TRIM15Q9C019 465 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 PRDM11Q9NQV5 511 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 ARL15Q9NXU5 204 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 TAAR2Q9P1P5 351 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 PAK5Q9P286 719 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 CLASP1Q7Z460 1538 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 POLR1AO95602 1720 aaPredicted RBP1.99□□□□□ -2.09
CCDC39-203ENST00000473854 MYO5CQ9NQX4 1742 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 LRRC9Q6ZRR7 1453 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 FHAD1B1AJZ9 1412 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 CASKIN1Q8WXD9 1431 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 RRBP1Q9P2E9 1410 aaKnown RBP1.99□□□□□ -2.09
CCDC39-203ENST00000473854 KDM6BO15054 1643 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 PREX2Q70Z35 1606 aa1.99□□□□□ -2.09
CCDC39-203ENST00000473854 MAPKBP1O60336 1514 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms