RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ITGA5P08648 1049 aa2.55□□□□□ -2
CALD1-216ENST00000473714 IQCF3P0C7M6 154 aa2.55□□□□□ -2
CALD1-216ENST00000473714 ATP1A3P13637 1013 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CEACAM1P13688 526 aa2.55□□□□□ -2
CALD1-216ENST00000473714 COL5A1P20908 1838 aaPredicted RBP2.55□□□□□ -2
CALD1-216ENST00000473714 SLC6A4P31645 630 aa2.55□□□□□ -2
CALD1-216ENST00000473714 PGM1P36871 562 aa2.55□□□□□ -2
CALD1-216ENST00000473714 GSTM5P46439 218 aa2.55□□□□□ -2
CALD1-216ENST00000473714 PGDP52209 483 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CHN2P52757 468 aa2.55□□□□□ -2
CALD1-216ENST00000473714 PRKAA2P54646 552 aa2.55□□□□□ -2
CALD1-216ENST00000473714 LOXL3P58215 753 aa2.55□□□□□ -2
CALD1-216ENST00000473714 MPP1Q00013 466 aa2.55□□□□□ -2
CALD1-216ENST00000473714 NUCB1Q02818 461 aa2.55□□□□□ -2
CALD1-216ENST00000473714 HGFACQ04756 655 aa2.55□□□□□ -2
CALD1-216ENST00000473714 TCP10Q12799 353 aa2.55□□□□□ -2
CALD1-216ENST00000473714 SPP2Q13103 211 aa2.55□□□□□ -2
CALD1-216ENST00000473714 NFYCQ13952 458 aa2.55□□□□□ -2
CALD1-216ENST00000473714 LY6DQ14210 128 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CSHL1Q14406 222 aa2.55□□□□□ -2
CALD1-216ENST00000473714 PTPAQ15257 358 aa2.55□□□□□ -2
CALD1-216ENST00000473714 SLC5A9Q2M3M2 681 aa2.55□□□□□ -2
CALD1-216ENST00000473714 BTBD16Q32M84 506 aa2.55□□□□□ -2
CALD1-216ENST00000473714 SPDYE7PQ495Y7 208 aa2.55□□□□□ -2
CALD1-216ENST00000473714 AASDHQ4L235 1098 aaPredicted RBP2.55□□□□□ -2
CALD1-216ENST00000473714 NOMO2Q5JPE7 1267 aa2.55□□□□□ -2
CALD1-216ENST00000473714 SPECC1Q5M775 1068 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CFAP58Q5T655 872 aa2.55□□□□□ -2
CALD1-216ENST00000473714 MFSD4BQ5TF39 518 aa2.55□□□□□ -2
CALD1-216ENST00000473714 ARHGAP40Q5TG30 622 aa2.55□□□□□ -2
CALD1-216ENST00000473714 HAUS3Q68CZ6 603 aa2.55□□□□□ -2
CALD1-216ENST00000473714 ZNF280DQ6N043 979 aa2.55□□□□□ -2
CALD1-216ENST00000473714 MZT2BQ6NZ67 158 aa2.55□□□□□ -2
CALD1-216ENST00000473714 TAF2Q6P1X5 1199 aa2.55□□□□□ -2
CALD1-216ENST00000473714 NFRKBQ6P4R8 1299 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CFAP161Q6P656 301 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CLEC9AQ6UXN8 241 aa2.55□□□□□ -2
CALD1-216ENST00000473714 DSTYKQ6XUX3 929 aa2.55□□□□□ -2
CALD1-216ENST00000473714 C15orf52Q6ZUT6 534 aaKnown RBP2.55□□□□□ -2
CALD1-216ENST00000473714 MRGPREQ86SM8 312 aa2.55□□□□□ -2
CALD1-216ENST00000473714 SLC44A2Q8IWA5 706 aaPredicted RBP2.55□□□□□ -2
CALD1-216ENST00000473714 GPR135Q8IZ08 494 aa2.55□□□□□ -2
CALD1-216ENST00000473714 DNAJB14Q8TBM8 379 aa2.55□□□□□ -2
CALD1-216ENST00000473714 SPPL3Q8TCT6 385 aa2.55□□□□□ -2
CALD1-216ENST00000473714 RILPL2Q969X0 211 aa2.55□□□□□ -2
CALD1-216ENST00000473714 EID2BQ96D98 161 aa2.55□□□□□ -2
CALD1-216ENST00000473714 RRP36Q96EU6 259 aaKnown RBP2.55□□□□□ -2
CALD1-216ENST00000473714 ZNF668Q96K58 619 aaPredicted RBP2.55□□□□□ -2
CALD1-216ENST00000473714 NUDT16L1Q9BRJ7 211 aaKnown RBP2.55□□□□□ -2
CALD1-216ENST00000473714 SALL3Q9BXA9 1300 aa2.55□□□□□ -2
CALD1-216ENST00000473714 TLR10Q9BXR5 811 aa2.55□□□□□ -2
CALD1-216ENST00000473714 FTOQ9C0B1 505 aaKnown RBP eCLIP2.55□□□□□ -2
CALD1-216ENST00000473714 SIL1Q9H173 461 aa2.55□□□□□ -2
CALD1-216ENST00000473714 TRPV6Q9H1D0 765 aa2.55□□□□□ -2
CALD1-216ENST00000473714 S1PR5Q9H228 398 aa2.55□□□□□ -2
CALD1-216ENST00000473714 PABPC3Q9H361 631 aaKnown RBP2.55□□□□□ -2
CALD1-216ENST00000473714 FZD8Q9H461 694 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CCDC134Q9H6E4 229 aa2.55□□□□□ -2
CALD1-216ENST00000473714 UNKLQ9H9P5 680 aaKnown RBP2.55□□□□□ -2
CALD1-216ENST00000473714 PLEKHA5Q9HAU0 1116 aa2.55□□□□□ -2
CALD1-216ENST00000473714 TMEM8AQ9HCN3 771 aa2.55□□□□□ -2
CALD1-216ENST00000473714 PREBQ9HCU5 417 aa2.55□□□□□ -2
CALD1-216ENST00000473714 RASSF1Q9NS23 344 aa2.55□□□□□ -2
CALD1-216ENST00000473714 KRT84Q9NSB2 600 aa2.55□□□□□ -2
CALD1-216ENST00000473714 NDUFAF4Q9P032 175 aa2.55□□□□□ -2
CALD1-216ENST00000473714 HESX1Q9UBX0 185 aa2.55□□□□□ -2
CALD1-216ENST00000473714 FEM1BQ9UK73 627 aa2.55□□□□□ -2
CALD1-216ENST00000473714 KLK13Q9UKR3 277 aa2.55□□□□□ -2
CALD1-216ENST00000473714 PLXNB3Q9ULL4 1909 aa2.55□□□□□ -2
CALD1-216ENST00000473714 DUSP12Q9UNI6 340 aa2.55□□□□□ -2
CALD1-216ENST00000473714 MRPS17Q9Y2R5 130 aaKnown RBP2.55□□□□□ -2
CALD1-216ENST00000473714 TMEM98Q9Y2Y6 226 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CDY1Q9Y6F8 540 aa2.55□□□□□ -2
CALD1-216ENST00000473714 SDK1Q7Z5N4 2213 aa2.54□□□□□ -2
CALD1-216ENST00000473714 B9A039 149 aa2.54□□□□□ -2
CALD1-216ENST00000473714 HOXC11O43248 304 aaPredicted RBP2.54□□□□□ -2
CALD1-216ENST00000473714 TIMM44O43615 452 aa2.54□□□□□ -2
CALD1-216ENST00000473714 HTATSF1O43719 755 aaKnown RBP2.54□□□□□ -2
CALD1-216ENST00000473714 TSPAN3O60637 253 aa2.54□□□□□ -2
CALD1-216ENST00000473714 DUSP11O75319 330 aaKnown RBP2.54□□□□□ -2
CALD1-216ENST00000473714 CABYRO75952 493 aa2.54□□□□□ -2
CALD1-216ENST00000473714 RECQL4O94761 1208 aa2.54□□□□□ -2
CALD1-216ENST00000473714 CSPG5O95196 566 aa2.54□□□□□ -2
CALD1-216ENST00000473714 RTN3O95197 1032 aaPredicted RBP2.54□□□□□ -2
CALD1-216ENST00000473714 MMP1P03956 469 aa2.54□□□□□ -2
CALD1-216ENST00000473714 PRKCBP05771 671 aa2.54□□□□□ -2
CALD1-216ENST00000473714 ANXA6P08133 673 aa2.54□□□□□ -2
CALD1-216ENST00000473714 SUPT20HL2P0C7V6 817 aa2.54□□□□□ -2
CALD1-216ENST00000473714 ZNF806P0C7X5 589 aa2.54□□□□□ -2
CALD1-216ENST00000473714 FCER1AP12319 257 aa2.54□□□□□ -2
CALD1-216ENST00000473714 HGFP14210 728 aa2.54□□□□□ -2
CALD1-216ENST00000473714 CSRP1P21291 193 aaKnown RBP2.54□□□□□ -2
CALD1-216ENST00000473714 ADORA2AP29274 412 aa2.54□□□□□ -2
CALD1-216ENST00000473714 SERPINA4P29622 427 aa2.54□□□□□ -2
CALD1-216ENST00000473714 CD6P30203 668 aa2.54□□□□□ -2
CALD1-216ENST00000473714 GATMP50440 423 aa2.54□□□□□ -2
CALD1-216ENST00000473714 DGKEP52429 567 aa2.54□□□□□ -2
CALD1-216ENST00000473714 PTTG1IPP53801 180 aa2.54□□□□□ -2
CALD1-216ENST00000473714 CASP6P55212 293 aa2.54□□□□□ -2
CALD1-216ENST00000473714 ARF3P61204 181 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms