RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ENTPD2Q9Y5L3 495 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 SNX10Q9Y5X0 201 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 HS3ST4Q9Y661 456 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 RP1P56715 2156 aa9.55□□□□□ -0.88
VCL-204ENST00000472585 SYNJ2BP-COX16A0A087WUM0 186 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 A0A0D9SEW6 157 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 CPED1A4D0V7 1026 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 TCAF2A6NFQ2 919 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 ENO4A6NNW6 628 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 CDRT15L2A8MXV6 281 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 SMAPO00193 183 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 ALOX15BO15296 676 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 GRAP2O75791 330 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 APOEP02649 317 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 FAM87AP0C7U9 286 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 TFE3P19532 575 aaPredicted RBP9.54□□□□□ -0.88
VCL-204ENST00000472585 CR2P20023 1033 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 BMP6P22004 513 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 RRM1P23921 792 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 CHRNA3P32297 505 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 NNMTP40261 264 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 PDX1P52945 283 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 NUCB2P80303 420 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 APBA1Q02410 837 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 STILQ15468 1287 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 C5orf22Q49AR2 442 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 PERM1Q5SV97 790 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 ZNF658Q5TYW1 1059 aaPredicted RBP9.54□□□□□ -0.88
VCL-204ENST00000472585 FAM46CQ5VWP2 391 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 ISM2Q6H9L7 571 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 GUSBP11Q6P575 273 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 CRTC1Q6UUV9 634 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 LINGO4Q6UY18 593 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 RBM44Q6ZP01 1051 aaKnown RBP9.54□□□□□ -0.88
VCL-204ENST00000472585 ATP6V0D2Q8N8Y2 350 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 ZSCAN1Q8NBB4 408 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 TPCN2Q8NHX9 752 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 STK32AQ8WU08 396 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 ZNF606Q8WXB4 792 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 SLC2A13Q96QE2 648 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 CPXM1Q96SM3 734 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 KLF6Q99612 283 aaPredicted RBP9.54□□□□□ -0.88
VCL-204ENST00000472585 SEMA3CQ99985 751 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 CALN1Q9BXU9 219 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 TCEAL2Q9H3H9 227 aaPredicted RBP9.54□□□□□ -0.88
VCL-204ENST00000472585 THAP9Q9H5L6 903 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 TMPRSS4Q9NRS4 437 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 COX16Q9P0S2 106 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 VANGL2Q9ULK5 521 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 HS3ST2Q9Y278 367 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 ACTL7AQ9Y615 435 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 WASF2Q9Y6W5 498 aa9.54□□□□□ -0.88
VCL-204ENST00000472585 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 BECN2A8MW95 431 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 KPNA3O00505 521 aaPredicted RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 PAGE1O75459 146 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 GCATO75600 419 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 PAK4O96013 591 aaPredicted RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 CSF2P04141 144 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 ZNF18P17022 549 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 ITGB6P18564 788 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 HNRNPA2B1P22626 353 aaKnown RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 ACADSBP45954 432 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 GCNT1Q02742 428 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 EIF2B5Q13144 721 aaKnown RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 SRSF6Q13247 344 aaKnown RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 ZNF177Q13360 481 aaPredicted RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 CDKN3Q16667 212 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 NEK5Q6P3R8 708 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 GJB7Q6PEY0 223 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 DPY19L3Q6ZPD9 716 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 NYAP1Q6ZVC0 841 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 DSG4Q86SJ6 1040 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 CLEC14AQ86T13 490 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 JAMLQ86YT9 394 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 FMR1NBQ8N0W7 255 aaPredicted RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 ZNF548Q8NEK5 533 aaPredicted RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 TMIEQ8NEW7 156 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 RPRD1AQ96P16 312 aaPredicted RBP9.53□□□□□ -0.88
VCL-204ENST00000472585 TNKS2Q9H2K2 1166 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 DDIT4Q9NX09 232 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 DNAJC28Q9NX36 388 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 NCKIPSDQ9NZQ3 722 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 VPS51Q9UID3 782 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 VPS28Q9UK41 221 aa9.53□□□□□ -0.88
VCL-204ENST00000472585 BSNQ9UPA5 3926 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 CCDC187A0A096LP49 1063 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 SPTY2D1-AS1A0A0U1RR47 76 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 DRGXA6NNA5 263 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 C1QTNF3-AMACRE9PGA6 284 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 SART1O43290 800 aaKnown RBP9.52□□□□□ -0.89
VCL-204ENST00000472585 NOBOXO60393 691 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 LEFTY1O75610 366 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 TCEA3O75764 348 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 ZMPSTE24O75844 475 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 ENDOD1O94919 500 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 LETM1O95202 739 aaPredicted RBP9.52□□□□□ -0.89
VCL-204ENST00000472585 PCDH8O95206 1070 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 ADCY5O95622 1261 aa9.52□□□□□ -0.89
VCL-204ENST00000472585 CD160O95971 181 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms