RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 IL36AQ9UHA7 158 aa13.78□□□□□ -0.2
HMGN1-211ENST00000471260 TCRBV5S1A1TA0A578 114 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 PRAMEF26H0Y7S4 382 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 KPNA3O00505 521 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-211ENST00000471260 SMAD6O43541 496 aaKnown RBP13.77□□□□□ -0.21
HMGN1-211ENST00000471260 TNFSF14O43557 240 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 LRIG2O94898 1065 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 DKK1O94907 266 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 WNT1P04628 370 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 PLEKP08567 350 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-211ENST00000471260 ATP1A3P13637 1013 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 L1CAMP32004 1257 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 RXRGP48443 463 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 ARRB1P49407 418 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-211ENST00000471260 ZNF143P52747 638 aaPredicted RBP13.77□□□□□ -0.21
HMGN1-211ENST00000471260 PPP2CBP62714 309 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 PPP2CAP67775 309 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 ARF5P84085 180 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 STAT4Q14765 748 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 PIP5KL1Q5T9C9 394 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 ACAD10Q6JQN1 1059 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 RWDD4Q6NW29 188 aaKnown RBP13.77□□□□□ -0.21
HMGN1-211ENST00000471260 LAYNQ6UX15 382 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 LINGO4Q6UY18 593 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 DPY19L3Q6ZPD9 716 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 IRF2BP2Q7Z5L9 587 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 SLFN11Q7Z7L1 901 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 PHLDB2Q86SQ0 1253 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 VSTM4Q8IW00 320 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 CHCHD4Q8N4Q1 142 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 TBC1D31Q96DN5 1066 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 LRIG1Q96JA1 1093 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 HEPHQ9BQS7 1158 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 KLK13Q9UKR3 277 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 HPCAL4Q9UM19 191 aa13.77□□□□□ -0.21
HMGN1-211ENST00000471260 PLXNA2O75051 1894 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 ZSCAN5CA6NGD5 496 aaPredicted RBP13.76□□□□□ -0.21
HMGN1-211ENST00000471260 KCNK3O14649 394 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 ZNF821O75541 412 aaPredicted RBP13.76□□□□□ -0.21
HMGN1-211ENST00000471260 TNFAIP3P21580 790 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 GLDCP23378 1020 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 UBASH3AP57075 661 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 NXPH1P58417 271 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 TAS2R38P59533 333 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 CARD16Q5EG05 197 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 ARSIQ5FYB1 569 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 DNAJC24Q6P3W2 148 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 ERN2Q76MJ5 926 aaKnown RBP13.76□□□□□ -0.21
HMGN1-211ENST00000471260 SLCO6A1Q86UG4 719 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 MCOLN2Q8IZK6 566 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 FAM174AQ8TBP5 190 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 ARHGEF2Q92974 986 aaKnown RBP13.76□□□□□ -0.21
HMGN1-211ENST00000471260 CNPY3Q9BT09 278 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 L2HGDHQ9H9P8 463 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 DONSONQ9NYP3 566 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 TMEM131Q92545 1883 aa13.76□□□□□ -0.21
HMGN1-211ENST00000471260 CHD5Q8TDI0 1954 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 FAM72CH0Y354 149 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 PLK4O00444 970 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 WNT9AO14904 365 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 ARHGAP6O43182 974 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 ZSCAN12O43309 604 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 RAMP2O60895 175 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 LEFTY1O75610 366 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 GJB6O95452 261 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 SERPINC1P01008 464 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 ITGAVP06756 1048 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 CDK4P11802 303 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 ITGB7P26010 798 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 HTR7P34969 479 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 NEK3P51956 506 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 POLD3Q15054 466 aaPredicted RBP13.75□□□□□ -0.21
HMGN1-211ENST00000471260 POM121L1PQ3SYA9 428 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 RAB6CQ53S08 254 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 EFHC2Q5JST6 749 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 FAM72AQ5TYM5 149 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 FAM72DQ6L9T8 149 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 DCUN1D2Q6PH85 259 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 HORMAD1Q86X24 394 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 FAM72BQ86X60 149 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 CCDC185Q8N715 623 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 CHST14Q8NCH0 376 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 SAP25Q8TEE9 199 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 CASKIN2Q8WXE0 1202 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 BAP1Q92560 729 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 ARRDC3Q96B67 414 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 MCEEQ96PE7 176 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 SYT11Q9BT88 431 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 EDEM3Q9BZQ6 932 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 RAB6CQ9H0N0 254 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 TNKS2Q9H2K2 1166 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 NDFIP2Q9NV92 336 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 TOR4AQ9NXH8 423 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 AIPL1Q9NZN9 384 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 DNAI1Q9UI46 699 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 NEU3Q9UQ49 428 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 BTBD3Q9Y2F9 522 aa13.75□□□□□ -0.21
HMGN1-211ENST00000471260 WASF2Q9Y6W5 498 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms