RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 PBX2P40425 430 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 WNT3AP56704 352 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 ERVK-21P61565 698 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 TNK2Q07912 1038 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 TEAD2Q15562 447 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 SPANXN3Q5MJ09 141 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 KDELC1Q6UW63 502 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 HTR3DQ70Z44 454 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 ANKRD42Q8N9B4 389 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 MGARPQ8TDB4 240 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 TTC17Q96AE7 1141 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 ZNF599Q96NL3 588 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 FCRL3Q96P31 734 aaPredicted RBP18.41■□□□□ 0.54
SMC4-211ENST00000469858 SMC6Q96SB8 1091 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 INTS9Q9NV88 658 aaKnown RBP18.41■□□□□ 0.54
SMC4-211ENST00000469858 IL1RAPL1Q9NZN1 696 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 CHD9Q3L8U1 2897 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 CBX4O00257 560 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 GFRA2O00451 464 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 MUSKO15146 869 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 KDELR3O43731 214 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 SPAG7O75391 227 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 MMP2P08253 660 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 PFKLP17858 780 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 HOXA9P31269 272 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 SLC5A9Q2M3M2 681 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 FSCBQ5H9T9 825 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 DENND5AQ6IQ26 1287 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 CYS1Q717R9 158 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 FAM217AQ8IXS0 508 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 MZB1Q8WU39 189 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 SEMA3CQ99985 751 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 POLR1EQ9GZS1 481 aaKnown RBP18.41■□□□□ 0.54
SMC4-211ENST00000469858 RABEP2Q9H5N1 569 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 CHRAC1Q9NRG0 131 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 UBA2Q9UBT2 640 aaPredicted RBP18.41■□□□□ 0.54
SMC4-211ENST00000469858 HCFC2Q9Y5Z7 792 aa18.41■□□□□ 0.54
SMC4-211ENST00000469858 XYLBO75191 536 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 GJB3O75712 270 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 USP1O94782 785 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 LUC7L3O95232 432 aaKnown RBP18.4■□□□□ 0.54
SMC4-211ENST00000469858 FGF19O95750 216 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 AVPR1AP37288 418 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 CHRNA4P43681 627 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 NTHL1P78549 312 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 CDH18Q13634 790 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 POU6F1Q14863 301 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 PDE12Q6L8Q7 609 aaKnown RBP18.4■□□□□ 0.54
SMC4-211ENST00000469858 ADGRD2Q7Z7M1 963 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 TMEM135Q86UB9 458 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 BBS5Q8N3I7 341 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 TDRD5Q8NAT2 981 aaKnown RBP18.4■□□□□ 0.54
SMC4-211ENST00000469858 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMC4-211ENST00000469858 ARRDC2Q8TBH0 407 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 CDKL2Q92772 493 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 MFSD3Q96ES6 412 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 CERS2Q96G23 380 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 ACE2Q9BYF1 805 aaPredicted RBP18.4■□□□□ 0.54
SMC4-211ENST00000469858 VPS45Q9NRW7 570 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 SLC17A6Q9P2U8 582 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 SOX13Q9UN79 622 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 ARHGAP26Q9UNA1 814 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 CCL26Q9Y258 94 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 ZNF510Q9Y2H8 683 aa18.4■□□□□ 0.54
SMC4-211ENST00000469858 FAM237BA0A1B0GVD1 139 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 MAGEB16A2A368 324 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 CCDC78A2IDD5 438 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 MOSPD3O75425 235 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 HNRNPA1P09651 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMC4-211ENST00000469858 KRT4P19013 534 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 MPP2Q14168 576 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 IHHQ14623 411 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 LRRC14Q15048 493 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 ANKRD20A4Q4UJ75 823 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 ARHGAP15Q53QZ3 475 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 RANBP10Q6VN20 620 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 RASSF3Q86WH2 238 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 CMTM8Q8IZV2 173 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 SLC25A41Q8N5S1 370 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 SH3RF2Q8TEC5 729 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 DDI1Q8WTU0 396 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 ATXN2LQ8WWM7 1075 aaKnown RBP18.39■□□□□ 0.53
SMC4-211ENST00000469858 CINPQ9BW66 212 aaPredicted RBP18.39■□□□□ 0.53
SMC4-211ENST00000469858 MLXIPLQ9NP71 852 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 ZNF180Q9UJW8 692 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 PDE4DIPQ5VU43 2346 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 ERVK-10P10266 1014 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 DDX6P26196 483 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMC4-211ENST00000469858 MZF1P28698 734 aaPredicted RBP18.39■□□□□ 0.53
SMC4-211ENST00000469858 TPGS1Q6ZTW0 290 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 ZNF771Q7L3S4 317 aaPredicted RBP18.39■□□□□ 0.53
SMC4-211ENST00000469858 GRASPQ7Z6J2 395 aaPredicted RBP18.39■□□□□ 0.53
SMC4-211ENST00000469858 WFDC5Q8TCV5 224 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 SEPT3Q9UH03 358 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 FAM169AQ9Y6X4 670 aa18.39■□□□□ 0.53
SMC4-211ENST00000469858 ZCWPW2A0A1B0GU75 182 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 GOLGA8RI6L899 631 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 NMBRP28336 390 aa18.38■□□□□ 0.53
SMC4-211ENST00000469858 GBP2P32456 591 aaPredicted RBP18.38■□□□□ 0.53
SMC4-211ENST00000469858 MGAT5Q09328 741 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms