RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SKIV2L2P42285 1042 aaKnown RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 MAGEA6P43360 314 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 PPIDQ08752 370 aaKnown RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 NIPAL4Q0D2K0 466 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 PCLAFQ15004 111 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 NAPRTQ6XQN6 538 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 JAZF1Q86VZ6 243 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 CCNYL1Q8N7R7 359 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 SNX31Q8N9S9 440 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 KLHDC9Q8NEP7 349 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 KCTD4Q8WVF5 259 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 ACBD6Q9BR61 282 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 FRMD8Q9BZ67 464 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 WDR55Q9H6Y2 383 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 CYP4F12Q9HCS2 524 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 PREBQ9HCU5 417 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 SSU72Q9NP77 194 aaKnown RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 ZNF180Q9UJW8 692 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 HBS1LQ9Y450 684 aaKnown RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 A0A0U1RQS6 177 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 ZCWPW2A0A1B0GU75 182 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 NEMP2A6NFY4 417 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 GSRP00390 522 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 RALBP11234 206 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 TSPAN8P19075 237 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 PTPN4P29074 926 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 HTRA3P83110 453 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 OCRLQ01968 901 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 SEMA3BQ13214 749 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 ALFQ53S48 1182 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 RAB41Q5JT25 222 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 CLLU1OSQ5K130 101 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 RAP1GAP2Q684P5 730 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 TMCO2Q7Z6W1 182 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 LCA5Q86VQ0 697 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 CHSY1Q86X52 802 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 NAT14Q8WUY8 206 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 EXT2Q93063 718 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 VPS39Q96JC1 886 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 EXOC2Q96KP1 924 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 TEKT5Q96M29 485 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 CHST12Q9NRB3 414 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 OR51F1A6NGY5 319 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 HSPA4LO95757 839 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 HLA-DQB2P05538 268 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 SLC10A3P09131 477 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 HAPLN1P10915 354 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 FGF3P11487 239 aaPredicted RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 CPA3P15088 417 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 MX2P20592 715 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 CCR1P32246 355 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 PGM1P36871 562 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 SERPINB9P50453 376 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 MGAT3Q09327 533 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 THOC5Q13769 683 aaKnown RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 LRRC36Q1X8D7 754 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 ZNF789Q5FWF6 425 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 TEDDM1Q5T9Z0 273 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 ABI1Q8IZP0 508 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 ZNF781Q8N8C0 355 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 RBM15BQ8NDT2 890 aaKnown RBP9.57□□□□□ -0.88
TOP3A-203ENST00000469739 CD99L2Q8TCZ2 262 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 SKA1Q96BD8 255 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 GBP5Q96PP8 586 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 SMIM14Q96QK8 99 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 PHACTR1Q9C0D0 580 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 VCX3BQ9H321 246 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 VCX3AQ9NNX9 186 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 SIRPGQ9P1W8 387 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 HS3ST4Q9Y661 456 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 PTCH2Q9Y6C5 1203 aa9.57□□□□□ -0.88
TOP3A-203ENST00000469739 NVLO15381 856 aaKnown RBP9.56□□□□□ -0.88
TOP3A-203ENST00000469739 GSC2O15499 205 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 IRAK2O43187 625 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 CA12O43570 354 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 PDE5AO76074 875 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 BAG2O95816 211 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 F9P00740 461 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 CKBP12277 381 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 TSHRP16473 764 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 HOXC8P31273 242 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 SERPINB6P35237 376 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 ACLYP53396 1101 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 SFSWAPQ12872 951 aaKnown RBP9.56□□□□□ -0.88
TOP3A-203ENST00000469739 CTXN3Q4LDR2 81 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 FBXO48Q5FWF7 155 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 CFAP157Q5JU67 520 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 C10orf120Q5SQS8 335 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 NXNQ6DKJ4 435 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 ARCQ7LC44 396 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 PTAR1Q7Z6K3 402 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-203ENST00000469739 TMEM173Q86WV6 379 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-203ENST00000469739 RYBPQ8N488 228 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-203ENST00000469739 ENDOVQ8N8Q3 282 aaKnown RBP9.56□□□□□ -0.88
TOP3A-203ENST00000469739 OR6P1Q8NGX9 317 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 URGCPQ8TCY9 931 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 MTBPQ96DY7 904 aa9.56□□□□□ -0.88
TOP3A-203ENST00000469739 GLT1D1Q96MS3 346 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms