RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 GTPBP3Q969Y2 492 aaKnown RBP3.6□□□□□ -1.83
TRIM59-202ENST00000468542 FAM131CQ96AQ9 280 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 MYEOVQ96EZ4 313 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 MYO19Q96H55 970 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 RBM41Q96IZ5 413 aaKnown RBP3.6□□□□□ -1.83
TRIM59-202ENST00000468542 CCDC114Q96M63 670 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 ZNF599Q96NL3 588 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 TSGA13Q96PP4 275 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 ALS2CR12Q96Q35 445 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 FOXQ1Q9C009 403 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 CIPCQ9C0C6 399 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 KLC2Q9H0B6 622 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 SIK2Q9H0K1 926 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 RAB6CQ9H0N0 254 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 MUC3BQ9H195 1237 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 PCED1AQ9H1Q7 454 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 DHX35Q9H5Z1 703 aaKnown RBP3.6□□□□□ -1.83
TRIM59-202ENST00000468542 LRRC19Q9H756 370 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 PCDH18Q9HCL0 1135 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 HAUS2Q9NVX0 235 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 PLK2Q9NYY3 685 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 CWC15Q9P013 229 aaKnown RBP3.6□□□□□ -1.83
TRIM59-202ENST00000468542 COX16Q9P0S2 106 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 SUN2Q9UH99 717 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 PCSK1NQ9UHG2 260 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 AMACRQ9UHK6 382 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 VPS51Q9UID3 782 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 VPS28Q9UK41 221 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 INTS6Q9UL03 887 aaKnown RBP3.6□□□□□ -1.83
TRIM59-202ENST00000468542 HCN2Q9UL51 889 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 CLEC4EQ9ULY5 219 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 HPCAL4Q9UM19 191 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 NDRG2Q9UN36 371 aaKnown RBP3.6□□□□□ -1.83
TRIM59-202ENST00000468542 HCN4Q9Y3Q4 1203 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 MTF2Q9Y483 593 aaPredicted RBP3.6□□□□□ -1.83
TRIM59-202ENST00000468542 MFHAS1Q9Y4C4 1052 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 PCDHA3Q9Y5H8 950 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 ZFHX2Q9C0A1 2572 aaPredicted RBP3.6□□□□□ -1.83
TRIM59-202ENST00000468542 RALGAPA1Q6GYQ0 2036 aa3.6□□□□□ -1.83
TRIM59-202ENST00000468542 A0A0D9SEW6 157 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 EDDM13A0A1B0GTR0 161 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 A0A1W2PQ67 120 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 A0A1W2PQF6 199 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 MACROD2A1Z1Q3 448 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 LRRD1A4D1F6 860 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 GRID2IPA4D2P6 1211 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ARHGAP42A6NI28 874 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 WASH3PC4AMC7 463 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RASA4BC9J798 803 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PROB1E7EW31 1015 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 APOC4-APOC2K7ER74 178 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SGK1O00141 431 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 MCF2LO15068 1137 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SLC7A4O43246 635 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 DAPK3O43293 454 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RASA4O43374 803 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PI15O43692 258 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CREB3O43889 395 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SYNCRIPO60506 623 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TSPAN3O60637 253 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 MAFKO60675 156 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PRAMEF11O60813 436 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 LILRB5O75023 590 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PALMO75781 387 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 KLF8O95600 359 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 GSRP00390 522 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 APOC2P02655 101 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 DCNP07585 359 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 HOXB2P14652 356 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TCF4P15884 667 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 GOT1P17174 413 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TGM2P21980 687 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CES1P23141 567 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 KDELR1P24390 212 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 COL8A1P27658 744 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 HOXD12P35452 270 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CETN2P41208 172 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 GARSP41250 739 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 DPP6P42658 865 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CDKN2BP42772 138 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 NOP2P46087 812 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CSNK1DP48730 415 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SERPINH1P50454 418 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PEX5P50542 639 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RENBPP51606 427 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 IRAK1P51617 712 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SUOXP51687 545 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CDH6P55285 790 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RWDD2BP57060 319 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RAB15P59190 212 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TAS2R40P59535 323 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 AP1S1P61966 158 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SNRPNP63162 240 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ARF5P84085 180 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 KDSRQ06136 332 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 IL10RBQ08334 325 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 NSUN2Q08J23 767 aaKnown RBP eCLIP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CCDC15Q0P6D6 951 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 GALNT2Q10471 571 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms