RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 C1QTNF1Q9BXJ1 281 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 BRD8Q9H0E9 1235 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 ANKRD6Q9Y2G4 727 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 CAPN8A6NHC0 703 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 TNPO2O14787 897 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 GRID2O43424 1007 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 IGFBP6P24592 240 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 HADHAP40939 763 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 RGS2P41220 211 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 FOLH1Q04609 750 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 CYLC2Q14093 348 aaPredicted RBP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 FSCN1Q16658 493 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 ARL13BQ3SXY8 428 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 ZC3HC1Q86WB0 502 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 IFNL1Q8IU54 200 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 PQLC1Q8N2U9 271 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 RP9Q8TA86 221 aaKnown RBP16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 RDH11Q8TC12 318 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 CNDP1Q96KN2 507 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 ZDHHC2Q9UIJ5 367 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 CEP350Q5VT06 3117 aa16.03■□□□□ 0.16
TSPAN4-211ENST00000468468 C17orf102A2RUQ5 167 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 CABYRO75952 493 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 USP17L7P0C7H9 530 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 PIM1P11309 404 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 GALNT2Q10471 571 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 CDH17Q12864 832 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 GRM2Q14416 872 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 INTS6LQ5JSJ4 861 aaKnown RBP16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 NXNQ6DKJ4 435 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 FBXL19Q6PCT2 694 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 TMC7Q7Z402 723 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 KCTD4Q8WVF5 259 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 TEKT5Q96M29 485 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 BTBD9Q96Q07 612 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 TBC1D30Q9Y2I9 924 aa16.02■□□□□ 0.16
TSPAN4-211ENST00000468468 CFLARO15519 480 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 FBXO21O94952 628 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 GRIA2P42262 883 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 PRKAA1Q13131 559 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 PRPSAP1Q14558 356 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 TMEM198Q66K66 360 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 BNC2Q6ZN30 1099 aaPredicted RBP16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 GPRIN1Q7Z2K8 1008 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 RCN3Q96D15 328 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 CELF6Q96J87 481 aaKnown RBP16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 CATSPER2Q96P56 530 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 PLEKHG4BQ96PX9 1271 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 VAT1Q99536 393 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 RHOJQ9H4E5 214 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 CRTAC1Q9NQ79 661 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 C6orf203Q9P0P8 240 aaPredicted RBP16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 IPPQ9Y573 584 aa16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 PDCD11Q14690 1871 aaKnown RBP16.02■□□□□ 0.15
TSPAN4-211ENST00000468468 TSC2P49815 1807 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 BRCA2P51587 3418 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 DDHD2O94830 711 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 PPARGP37231 505 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 CSRP3P50461 194 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 CHN2P52757 468 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 THOP1P52888 689 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 RPL26P61254 145 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 PURAQ00577 322 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 NAPEPLDQ6IQ20 393 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 OTOP3Q7RTS5 596 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 SAPCD2Q86UD0 394 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 SLC41A1Q8IVJ1 513 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 USP33Q8TEY7 942 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 SMOQ99835 787 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 NSMCE4AQ9NXX6 385 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 OR12D3Q9UGF7 316 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 ZNF232Q9UNY5 417 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 C9IYK1 514 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 XRCC1P18887 633 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 MSX2P35548 267 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 HK2P52789 917 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 PRKAA2P54646 552 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 GJA9P57773 515 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 SLC12A1Q13621 1099 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 FLOT2Q14254 428 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 RGMBQ6NW40 437 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 FSTL5Q8N475 847 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 CPSF7Q8N684 471 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 TRPV1Q8NER1 839 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 EDEM1Q92611 657 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 DCUN1D1Q96GG9 259 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 COLEC11Q9BWP8 271 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 WDCPQ9H6R7 721 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 CACNG4Q9UBN1 327 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 CDYLQ9Y232 598 aa16.01■□□□□ 0.15
TSPAN4-211ENST00000468468 GABRDO14764 452 aa16■□□□□ 0.15
TSPAN4-211ENST00000468468 AHSGP02765 367 aa16■□□□□ 0.15
TSPAN4-211ENST00000468468 SLC35E2BP0CK96 405 aa16■□□□□ 0.15
TSPAN4-211ENST00000468468 IMPDH2P12268 514 aa16■□□□□ 0.15
TSPAN4-211ENST00000468468 ENO3P13929 434 aaPredicted RBP16■□□□□ 0.15
TSPAN4-211ENST00000468468 TPP2P29144 1249 aaPredicted RBP16■□□□□ 0.15
TSPAN4-211ENST00000468468 PKNOX1P55347 436 aa16■□□□□ 0.15
TSPAN4-211ENST00000468468 MRPS22P82650 360 aaKnown RBP16■□□□□ 0.15
TSPAN4-211ENST00000468468 CRHR2Q13324 411 aa16■□□□□ 0.15
TSPAN4-211ENST00000468468 IRF5Q13568 498 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms