RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 DRD3P35462 400 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 ETFBP38117 255 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 SFSWAPQ12872 951 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 ACAP1Q15027 740 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 ASTE1Q2TB18 679 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 TDRD12Q587J7 1177 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 DCAF12L1Q5VU92 463 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 SPECC1LQ69YQ0 1117 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 RETSATQ6NUM9 610 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 SCYL2Q6P3W7 929 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 Q6ZVU0 165 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 VPS36Q86VN1 386 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 PSTKQ8IV42 348 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 VSTM4Q8IW00 320 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 RTL3Q8N8U3 475 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 OR8K1Q8NGG5 319 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 OR2A12Q8NGT7 310 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 ARHGEF2Q92974 986 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 ZNF653Q96CK0 615 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 EIF3CQ99613 913 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 EDEM2Q9BV94 578 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 NEUROG2Q9H2A3 272 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 C6orf106Q9H6K1 298 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 MRPL47Q9HD33 250 aaKnown RBP11.39□□□□□ -0.59
COL4A6-205ENST00000468338 OSGEPQ9NPF4 335 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 SUSD2Q9UGT4 822 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 SARDHQ9UL12 918 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 SCINQ9Y6U3 715 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 DOCK9Q9BZ29 2069 aa11.39□□□□□ -0.59
COL4A6-205ENST00000468338 A0A1B0GTW7 788 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 A0A1W2PP55 124 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 LRCH4O75427 683 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 CYP1A2P05177 515 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 IGHV4-34P06331 123 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 GOT1P17174 413 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 MIPP30301 263 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 PCK1P35558 622 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 ACVRL1P37023 503 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 SERPINH1P50454 418 aaKnown RBP11.38□□□□□ -0.59
COL4A6-205ENST00000468338 GALCP54803 685 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 YBEYP58557 167 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-205ENST00000468338 FOXK2Q01167 660 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 TRIM14Q14142 442 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 ACCSLQ4AC99 568 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 ERMARDQ5T6L9 678 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 RWDD4Q6NW29 188 aaKnown RBP11.38□□□□□ -0.59
COL4A6-205ENST00000468338 ALKBH5Q6P6C2 394 aaKnown RBP11.38□□□□□ -0.59
COL4A6-205ENST00000468338 SARM1Q6SZW1 724 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 LINGO4Q6UY18 593 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 DGLUCYQ7Z3D6 616 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 DSG4Q86SJ6 1040 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 FAM124AQ86V42 546 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 CCDC116Q8IYX3 515 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 RGL4Q8IZJ4 473 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 UMODL1-AS1Q8N2C9 162 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 ATP11CQ8NB49 1132 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 RNF214Q8ND24 703 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 OR8D1Q8WZ84 308 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 VOPP1Q96AW1 172 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 ISG20Q96AZ6 181 aaKnown RBP11.38□□□□□ -0.59
COL4A6-205ENST00000468338 BIRC7Q96CA5 298 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 PEBP4Q96S96 227 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 NCAPGQ9BPX3 1015 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 SPON2Q9BUD6 331 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 NUSAP1Q9BXS6 441 aaKnown RBP11.38□□□□□ -0.59
COL4A6-205ENST00000468338 CEP44Q9C0F1 390 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 TSPAN10Q9H1Z9 355 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-205ENST00000468338 ATP13A1Q9HD20 1204 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 DNAI1Q9UI46 699 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 NCKAP1Q9Y2A7 1128 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 NCOR2Q9Y618 2525 aa11.38□□□□□ -0.59
COL4A6-205ENST00000468338 SSU72P8A0A1W2PR75 194 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 DCDC2BA2VCK2 349 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 C4orf47A7E2U8 309 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 MEI4A8MW99 385 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 CBX4O00257 560 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 BCAT2O15382 392 aaPredicted RBP11.37□□□□□ -0.59
COL4A6-205ENST00000468338 SLC7A4O43246 635 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 KDELR3O43731 214 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 RAMP2O60895 175 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 GJB3O75712 270 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 RNF8O76064 485 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 IL1BP01584 269 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 CTSLP07711 333 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 GNSP15586 552 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 DESP17661 470 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 ENGP17813 658 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 CD27P26842 260 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 EPHB2P29323 1055 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 PSMD8P48556 350 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 HCAR3P49019 387 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 METAP1P53582 386 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 ADPRHP54922 357 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 CA9Q16790 459 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 FAM46CQ5VWP2 391 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 KIAA0895LQ68EN5 471 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 C16orf46Q6P387 395 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 C22orf39Q6P5X5 142 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 HDDC3Q8N4P3 179 aa11.37□□□□□ -0.59
COL4A6-205ENST00000468338 PCDH20Q8N6Y1 951 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms