RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 EDEM3Q9BZQ6 932 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 ERVMER34-1Q9H9K5 563 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 PARVAQ9NVD7 372 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 AIPL1Q9NZN9 384 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 NEU3Q9UQ49 428 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 TP53BP1Q12888 1972 aaPredicted RBP19.46■□□□□ 0.71
COL7A1-207ENST00000467985 CHD5Q8TDI0 1954 aa19.46■□□□□ 0.71
COL7A1-207ENST00000467985 ZSCAN5CA6NGD5 496 aaPredicted RBP19.45■□□□□ 0.7
COL7A1-207ENST00000467985 ZNF821O75541 412 aaPredicted RBP19.45■□□□□ 0.7
COL7A1-207ENST00000467985 LEFTY1O75610 366 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 SERPINC1P01008 464 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 MAT2AP31153 395 aaKnown RBP19.45■□□□□ 0.7
COL7A1-207ENST00000467985 NXPH1P58417 271 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 TAS2R38P59533 333 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 STAT4Q14765 748 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 SFMBT2Q5VUG0 894 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 CHCHD4Q8N4Q1 142 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 ARRDC3Q96B67 414 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 FUCA2Q9BTY2 467 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 NDFIP2Q9NV92 336 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 DONSONQ9NYP3 566 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 BTBD3Q9Y2F9 522 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 WASF2Q9Y6W5 498 aa19.45■□□□□ 0.7
COL7A1-207ENST00000467985 ANKRD11Q6UB99 2663 aaPredicted RBP19.45■□□□□ 0.7
COL7A1-207ENST00000467985 DSPP15924 2871 aaKnown RBP19.45■□□□□ 0.7
COL7A1-207ENST00000467985 WNT9AO14904 365 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 TNFSF14O43557 240 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 GZMAP12544 262 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 ITGB7P26010 798 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 EPHB2P29323 1055 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 HTR7P34969 479 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 ACVRL1P37023 503 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 PRKCIP41743 596 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 CCNHP51946 323 aaPredicted RBP19.44■□□□□ 0.7
COL7A1-207ENST00000467985 IQCB1Q15051 598 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 HORMAD1Q86X24 394 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 RTL3Q8N8U3 475 aaKnown RBP19.44■□□□□ 0.7
COL7A1-207ENST00000467985 GATA6Q92908 595 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 LRIG1Q96JA1 1093 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 CATSPERBQ9H7T0 1116 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 KLK13Q9UKR3 277 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 FZD10Q9ULW2 581 aa19.44■□□□□ 0.7
COL7A1-207ENST00000467985 FCF1Q9Y324 198 aaKnown RBP19.44■□□□□ 0.7
COL7A1-207ENST00000467985 A0A1W2PQU0 124 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 C1QTNF9BB2RNN3 333 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 FGF10O15520 208 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-207ENST00000467985 KDELR3O43731 214 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 CD160O95971 181 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 GSRP00390 522 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 C1QTNF9P0C862 333 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 NEK3P51956 506 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 YBEYP58557 167 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-207ENST00000467985 MAMLD1Q13495 774 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 TMC6Q7Z403 805 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 ZSCAN30Q86W11 494 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 KDF1Q8NAX2 398 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-207ENST00000467985 CASKIN2Q8WXE0 1202 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 NAP1L5Q96NT1 182 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-207ENST00000467985 TMEM121BQ9BXQ6 578 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-207ENST00000467985 MAGEB5Q9BZ81 275 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 HAUS4Q9H6D7 363 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 TAS2R14Q9NYV8 317 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 HECAQ9UBI9 543 aaPredicted RBP19.43■□□□□ 0.7
COL7A1-207ENST00000467985 CFAP47Q6ZTR5 3102 aa19.43■□□□□ 0.7
COL7A1-207ENST00000467985 TMCO5BA8MYB1 307 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 EIF3CLB5ME19 914 aaKnown RBP19.42■□□□□ 0.7
COL7A1-207ENST00000467985 PCDH8O95206 1070 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 ITGAVP06756 1048 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 RXRGP48443 463 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 SNRPD1P62314 119 aaKnown RBP19.42■□□□□ 0.7
COL7A1-207ENST00000467985 IL9RQ01113 521 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 KLHL30Q0D2K2 578 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 NR1I3Q14994 352 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 ZNF284Q2VY69 593 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 PARP15Q460N3 678 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 FIGNQ5HY92 759 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 PLEKHA7Q6IQ23 1121 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 FBXL19Q6PCT2 694 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 SLCO6A1Q86UG4 719 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 ZNF354CQ86Y25 554 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 PYROXD2Q8N2H3 581 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 PNPLA1Q8N8W4 532 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 SAP25Q8TEE9 199 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 TRIM11Q96F44 468 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 EIF3CQ99613 913 aaKnown RBP19.42■□□□□ 0.7
COL7A1-207ENST00000467985 TTYH3Q9C0H2 523 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 ZDHHC6Q9H6R6 413 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 FTSJ1Q9UET6 329 aa19.42■□□□□ 0.7
COL7A1-207ENST00000467985 WASH4PA8MWX3 477 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 AP1G1O43747 822 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 CREB3O43889 395 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 DKK1O94907 266 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 POP4O95707 220 aaKnown RBP19.41■□□□□ 0.7
COL7A1-207ENST00000467985 ATXN1LP0C7T5 689 aaKnown RBP19.41■□□□□ 0.7
COL7A1-207ENST00000467985 ADRB3P13945 408 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 PSMA2P25787 234 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 AKT2P31751 481 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 RPS21P63220 83 aaKnown RBP19.41■□□□□ 0.7
COL7A1-207ENST00000467985 PRAMEF14Q5SWL7 426 aa19.41■□□□□ 0.7
COL7A1-207ENST00000467985 KIAA1161Q6NSJ0 714 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms