RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CTSOP43234 321 aaPredicted RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 OASLQ15646 514 aaKnown RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 PTPRNQ16849 979 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 HSF5Q4G112 596 aaPredicted RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 MARC1Q5VT66 337 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 LINGO4Q6UY18 593 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 TRMT11Q7Z4G4 463 aaKnown RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 ZNF687Q8N1G0 1237 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 ZNF513Q8N8E2 541 aaPredicted RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 C12orf50Q8NA57 414 aaPredicted RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 CYB5D2Q8WUJ1 264 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 HTR3CQ8WXA8 447 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 SORCS1Q8WY21 1168 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 ATG4AQ8WYN0 398 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 MAML1Q92585 1016 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 EZH1Q92800 747 aaPredicted RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 LRRC45Q96CN5 670 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 QKIQ96PU8 341 aaKnown RBP eCLIP15.01□□□□□ -0.01
DDX56-208ENST00000467318 VAT1Q99536 393 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 FAM118BQ9BPY3 351 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 SMARCAL1Q9NZC9 954 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 AMACRQ9UHK6 382 aa15.01□□□□□ -0.01
DDX56-208ENST00000467318 FEZ2Q9UHY8 353 aaPredicted RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 DRG1Q9Y295 367 aaKnown RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 NYNRINQ9P2P1 1898 aaKnown RBP15.01□□□□□ -0.01
DDX56-208ENST00000467318 ATP9BO43861 1147 aa15□□□□□ -0.01
DDX56-208ENST00000467318 SHOX2O60902 331 aaPredicted RBP15□□□□□ -0.01
DDX56-208ENST00000467318 CD160O95971 181 aa15□□□□□ -0.01
DDX56-208ENST00000467318 PEX11BO96011 259 aa15□□□□□ -0.01
DDX56-208ENST00000467318 MT-CO1P00395 513 aa15□□□□□ -0.01
DDX56-208ENST00000467318 ITGAVP06756 1048 aa15□□□□□ -0.01
DDX56-208ENST00000467318 CHRNB1P11230 501 aa15□□□□□ -0.01
DDX56-208ENST00000467318 TARSP26639 723 aaKnown RBP15□□□□□ -0.01
DDX56-208ENST00000467318 LMNB2Q03252 620 aa15□□□□□ -0.01
DDX56-208ENST00000467318 ZNF234Q14588 700 aa15□□□□□ -0.01
DDX56-208ENST00000467318 LBRQ14739 615 aaKnown RBP15□□□□□ -0.01
DDX56-208ENST00000467318 UBXN2BQ14CS0 331 aa15□□□□□ -0.01
DDX56-208ENST00000467318 TEX26Q8N6G2 289 aa15□□□□□ -0.01
DDX56-208ENST00000467318 IFT81Q8WYA0 676 aa15□□□□□ -0.01
DDX56-208ENST00000467318 MAGOHBQ96A72 148 aaKnown RBP15□□□□□ -0.01
DDX56-208ENST00000467318 ISG20Q96AZ6 181 aaKnown RBP15□□□□□ -0.01
DDX56-208ENST00000467318 MYO19Q96H55 970 aa15□□□□□ -0.01
DDX56-208ENST00000467318 MRGPRX3Q96LB0 322 aa15□□□□□ -0.01
DDX56-208ENST00000467318 GDAP1L1Q96MZ0 367 aa15□□□□□ -0.01
DDX56-208ENST00000467318 CEP44Q9C0F1 390 aa15□□□□□ -0.01
DDX56-208ENST00000467318 TBC1D17Q9HA65 648 aa15□□□□□ -0.01
DDX56-208ENST00000467318 SEPT3Q9UH03 358 aa15□□□□□ -0.01
DDX56-208ENST00000467318 SLCO3A1Q9UIG8 710 aa15□□□□□ -0.01
DDX56-208ENST00000467318 ZNF148Q9UQR1 794 aa15□□□□□ -0.01
DDX56-208ENST00000467318 BDP1A6H8Y1 2624 aa15□□□□□ -0.01
DDX56-208ENST00000467318 FAM170BA6NMN3 283 aa15□□□□□ -0.01
DDX56-208ENST00000467318 STK25O00506 426 aa15□□□□□ -0.01
DDX56-208ENST00000467318 SRCP12931 536 aa15□□□□□ -0.01
DDX56-208ENST00000467318 RBL1P28749 1068 aa15□□□□□ -0.01
DDX56-208ENST00000467318 CHRNA3P32297 505 aa15□□□□□ -0.01
DDX56-208ENST00000467318 HSPA9P38646 679 aaKnown RBP15□□□□□ -0.01
DDX56-208ENST00000467318 STK19P49842 368 aaPredicted RBP15□□□□□ -0.01
DDX56-208ENST00000467318 IFI35P80217 286 aaPredicted RBP15□□□□□ -0.01
DDX56-208ENST00000467318 SLC10A7Q0GE19 358 aa15□□□□□ -0.01
DDX56-208ENST00000467318 ENPP2Q13822 863 aa15□□□□□ -0.01
DDX56-208ENST00000467318 EMC10Q5UCC4 262 aa15□□□□□ -0.01
DDX56-208ENST00000467318 SDE2Q6IQ49 451 aa15□□□□□ -0.01
DDX56-208ENST00000467318 LRIG3Q6UXM1 1119 aa15□□□□□ -0.01
DDX56-208ENST00000467318 SERPINA13PQ6UXR4 307 aa15□□□□□ -0.01
DDX56-208ENST00000467318 TRIM67Q6ZTA4 783 aa15□□□□□ -0.01
DDX56-208ENST00000467318 CHPFQ8IZ52 775 aa15□□□□□ -0.01
DDX56-208ENST00000467318 IQCKQ8N0W5 287 aa15□□□□□ -0.01
DDX56-208ENST00000467318 ATL2Q8NHH9 583 aa15□□□□□ -0.01
DDX56-208ENST00000467318 PSKH2Q96QS6 385 aa15□□□□□ -0.01
DDX56-208ENST00000467318 TMEM245Q9H330 911 aa15□□□□□ -0.01
DDX56-208ENST00000467318 NFU1Q9UMS0 254 aa15□□□□□ -0.01
DDX56-208ENST00000467318 KCNK1O00180 336 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 RAD51CO43502 376 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 PHF2O75151 1096 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 NEBLO76041 1014 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 STK10O94804 968 aaKnown RBP14.99□□□□□ -0.01
DDX56-208ENST00000467318 TMCC1O94876 653 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 NTSR1P30989 418 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 TIE1P35590 1138 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 MMP13P45452 471 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 FNTAP49354 379 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 CARSP49589 748 aaKnown RBP14.99□□□□□ -0.01
DDX56-208ENST00000467318 SKOR1P84550 965 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 NSUN2Q08J23 767 aaKnown RBP eCLIP14.99□□□□□ -0.01
DDX56-208ENST00000467318 SNX1Q13596 522 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 ZNF235Q14590 738 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 DLG2Q15700 870 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 ACCSLQ4AC99 568 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 FNDC3BQ53EP0 1204 aaKnown RBP14.99□□□□□ -0.01
DDX56-208ENST00000467318 TEX44Q53QW1 395 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 C2orf27AQ580R0 203 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 EGFLAMQ63HQ2 1017 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 PLPP6Q8IY26 295 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 PCDH20Q8N6Y1 951 aaKnown RBP14.99□□□□□ -0.01
DDX56-208ENST00000467318 PJA1Q8NG27 643 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 USP33Q8TEY7 942 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 LRRN4Q8WUT4 740 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 RUNDC3BQ96NL0 473 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 IL12RB2Q99665 862 aa14.99□□□□□ -0.01
DDX56-208ENST00000467318 TMEM121Q9BTD3 319 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms