RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 DRGXA6NNA5 263 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 I6L893 689 aaPredicted RBP16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CBX4O00257 560 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 DDX3YO15523 660 aaKnown RBP16.36■□□□□ 0.21
COL16A1-207ENST00000466829 ATP9BO43861 1147 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 SNAP91O60641 907 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CER1O95813 267 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CTAGE8P0CG41 777 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 DESP17661 470 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CD27P26842 260 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 FOXC1Q12948 553 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 SEMA3BQ13214 749 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 PIGHQ14442 188 aaPredicted RBP16.36■□□□□ 0.21
COL16A1-207ENST00000466829 POM121L1PQ3SYA9 428 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 Q6ZVU0 165 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CTAGE6Q86UF2 777 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CTAGE4Q8IX94 777 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 COG1Q8WTW3 980 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 FRS2Q8WU20 508 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CCDC114Q96M63 670 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CNTNAP3BQ96NU0 1288 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CNTNAP3Q9BZ76 1288 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 GAREM1Q9H706 876 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 TM9SF3Q9HD45 589 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 DNAAF2Q9NVR5 837 aaKnown RBP16.36■□□□□ 0.21
COL16A1-207ENST00000466829 FZD4Q9ULV1 537 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 PCDHB9Q9Y5E1 797 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 PCDHA3Q9Y5H8 950 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 OR51B4Q9Y5P0 310 aa16.36■□□□□ 0.21
COL16A1-207ENST00000466829 CNOT1A5YKK6 2376 aaKnown RBP16.36■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3DA0A087WVF3 549 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3IA0A087WXS9 549 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3EA0A087X179 549 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3KA0A087X1G2 549 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 UQCRHLA0A096LP55 91 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 A0A0D9SEW6 157 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3FA6NER0 549 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-207ENST00000466829 C2CD4BA6NLJ0 364 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TMEM110-MUSTN1A8MSY1 372 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3LB9A6J9 549 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 C1QTNF3-AMACRE9PGA6 284 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 KCNK3O14649 394 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 SPOPO43791 374 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 UQCRHP07919 91 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3HP0C7X1 549 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 GPD1P21695 349 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 RFC1P35251 1148 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-207ENST00000466829 ADRA1BP35368 520 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 RECQLP46063 649 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-207ENST00000466829 C21orf59P57076 290 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 SIM1P81133 766 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-207ENST00000466829 SLC14A1Q13336 389 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 ACAP1Q15027 740 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 CCDC181Q5TID7 509 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3GQ6DHY5 549 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3CQ6IPX1 549 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 SCYL2Q6P3W7 929 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 LINGO4Q6UY18 593 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 ZNF683Q8IZ20 524 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TBC1D3Q8IZP1 549 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-207ENST00000466829 SH2D3CQ8N5H7 860 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 AADATQ8N5Z0 425 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 NIPA2Q8N8Q9 360 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 OR2T34Q8NGX1 318 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 FAM172AQ8WUF8 416 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 CARD9Q9H257 536 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 AASDHPPTQ9NRN7 309 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 OR12D3Q9UGF7 316 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 VPS51Q9UID3 782 aa16.35■□□□□ 0.21
COL16A1-207ENST00000466829 TTC7AQ9ULT0 858 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-207ENST00000466829 PACSIN2Q9UNF0 486 aaPredicted RBP16.35■□□□□ 0.21
COL16A1-207ENST00000466829 MUC22E2RYF6 1773 aaPredicted RBP16.34■□□□□ 0.21
COL16A1-207ENST00000466829 IGLV3-10A0A075B6K4 115 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 SPAARA0A1B0GVQ0 90 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 ZNF185O15231 689 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 SH3BP5O60239 455 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 ENDOD1O94919 500 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 MT-CO1P00395 513 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 C7P10643 843 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 PMLP29590 882 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 CTNNA1P35221 906 aaKnown RBP16.34■□□□□ 0.21
COL16A1-207ENST00000466829 PTPN9P43378 593 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 PEX5P50542 639 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 VASPP50552 380 aaPredicted RBP16.34■□□□□ 0.21
COL16A1-207ENST00000466829 DNA2P51530 1060 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 HLA-BQ31612 363 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 RAB6CQ53S08 254 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 RETSATQ6NUM9 610 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 STRADAQ7RTN6 431 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 BNIPLQ7Z465 357 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 RASGEF1CQ8N431 466 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 DCAF4L2Q8NA75 395 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 OR7D4Q8NG98 312 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 ACTRT1Q8TDG2 376 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 SETD7Q8WTS6 366 aaKnown RBP16.34■□□□□ 0.21
COL16A1-207ENST00000466829 SKA1Q96BD8 255 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 BTBD6Q96KE9 485 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 PSMB7Q99436 277 aa16.34■□□□□ 0.21
COL16A1-207ENST00000466829 RAB6CQ9H0N0 254 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms