RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 HPS4Q9NQG7 708 aa12.33□□□□□ -0.44
VPS16-206ENST00000466415 UBP1Q9NZI7 540 aa12.33□□□□□ -0.44
VPS16-206ENST00000466415 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
VPS16-206ENST00000466415 PRRC2BQ5JSZ5 2229 aaKnown RBP12.32□□□□□ -0.44
VPS16-206ENST00000466415 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.32□□□□□ -0.44
VPS16-206ENST00000466415 AP3B1O00203 1094 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 TP73O15350 636 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 ZMPSTE24O75844 475 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 CD86P42081 329 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 DSC2Q02487 901 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 KDSRQ06136 332 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 SLC20A2Q08357 652 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 PDIA2Q13087 525 aaKnown RBP12.32□□□□□ -0.44
VPS16-206ENST00000466415 HTR4Q13639 388 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 PREPLQ4J6C6 727 aaPredicted RBP12.32□□□□□ -0.44
VPS16-206ENST00000466415 MBLAC2Q68D91 279 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 LINC00523Q86TU6 105 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 ZBED8Q8IZ13 594 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 MREGQ8N565 214 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 DNAAF3Q8N9W5 541 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 SPATA22Q8NHS9 363 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 CSGALNACT1Q8TDX6 532 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 ZNF419Q96HQ0 510 aaPredicted RBP12.32□□□□□ -0.44
VPS16-206ENST00000466415 EXOC2Q96KP1 924 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 LMLNQ96KR4 655 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 PWWP2AQ96N64 755 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 GUCD1Q96NT3 240 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 PSKH2Q96QS6 385 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 RUFY1Q96T51 708 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 SEMA3CQ99985 751 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 TBL1YQ9BQ87 522 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 MGME1Q9BQP7 344 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 MLPHQ9BV36 600 aaPredicted RBP12.32□□□□□ -0.44
VPS16-206ENST00000466415 FICDQ9BVA6 458 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 CIPCQ9C0C6 399 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 BRD9Q9H8M2 597 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 SCUBE2Q9NQ36 999 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 DEC1Q9P2X7 70 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 FCF1Q9Y324 198 aaKnown RBP12.32□□□□□ -0.44
VPS16-206ENST00000466415 ACTL7AQ9Y615 435 aa12.32□□□□□ -0.44
VPS16-206ENST00000466415 TRANK1O15050 2925 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 CXorf51AA0A1B0GTR3 108 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 C2CD4DB7Z1M9 353 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 TULP3O75386 442 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 PMPCBO75439 489 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 IGSF6O95976 241 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 MT-CYBP00156 380 aaPredicted RBP12.31□□□□□ -0.44
VPS16-206ENST00000466415 CPP00450 1065 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 ASLP04424 464 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 SERPINF2P08697 491 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 MLNP12872 115 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 CES1P23141 567 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 NNMTP40261 264 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 MAGEA4P43358 317 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 ECT2LQ008S8 904 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 SPARCL1Q14515 664 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 CASP8Q14790 479 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 CYTH1Q15438 398 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 PCSK7Q16549 785 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 ITPRIPL2Q3MIP1 535 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 DENND2CQ68D51 928 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
VPS16-206ENST00000466415 LRRC8BQ6P9F7 803 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 TRMT10CQ7L0Y3 403 aaKnown RBP12.31□□□□□ -0.44
VPS16-206ENST00000466415 C12orf40Q86WS4 652 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 PGBD5Q8N414 524 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 TSEN2Q8NCE0 465 aaKnown RBP12.31□□□□□ -0.44
VPS16-206ENST00000466415 TTC8Q8TAM2 541 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 IFT43Q96FT9 208 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 IMP4Q96G21 291 aaKnown RBP12.31□□□□□ -0.44
VPS16-206ENST00000466415 OXNAD1Q96HP4 312 aaPredicted RBP12.31□□□□□ -0.44
VPS16-206ENST00000466415 TTC25Q96NG3 672 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 GORASP1Q9BQQ3 440 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 CDC42EP4Q9H3Q1 356 aaKnown RBP12.31□□□□□ -0.44
VPS16-206ENST00000466415 VPS45Q9NRW7 570 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 INTS6Q9UL03 887 aaKnown RBP12.31□□□□□ -0.44
VPS16-206ENST00000466415 SLC8A2Q9UPR5 921 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 FAM50BQ9Y247 325 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 LAMA3Q16787 3333 aa12.31□□□□□ -0.44
VPS16-206ENST00000466415 KIF26AQ9ULI4 1882 aaPredicted RBP12.31□□□□□ -0.44
VPS16-206ENST00000466415 ANHXE9PGG2 379 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 MUSKO15146 869 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 INSIG1O15503 277 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 SUN1O94901 812 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 ATP5BP06576 529 aaKnown RBP12.3□□□□□ -0.44
VPS16-206ENST00000466415 CA4P22748 312 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 CTSOP43234 321 aaPredicted RBP12.3□□□□□ -0.44
VPS16-206ENST00000466415 SCNN1BP51168 640 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 WNT3AP56704 352 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 SESN2P58004 480 aaPredicted RBP12.3□□□□□ -0.44
VPS16-206ENST00000466415 ST8SIA6P61647 398 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 NIPAL4Q0D2K0 466 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 CDH17Q12864 832 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 MTM1Q13496 603 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 ACCSLQ4AC99 568 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 SPDYCQ5MJ68 293 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 FNBP1LQ5T0N5 605 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 CFAP58Q5T655 872 aa12.3□□□□□ -0.44
VPS16-206ENST00000466415 KCTD11Q693B1 232 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms