RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 STAG3L1P0CL83 205 aa20■□□□□ 0.79
SDF4-205ENST00000465727 SLC5A3P53794 718 aa20■□□□□ 0.79
SDF4-205ENST00000465727 RELAQ04206 551 aa20■□□□□ 0.79
SDF4-205ENST00000465727 ZBTB17Q13105 803 aa20■□□□□ 0.79
SDF4-205ENST00000465727 SLC12A1Q13621 1099 aa20■□□□□ 0.79
SDF4-205ENST00000465727 SQLEQ14534 574 aa20■□□□□ 0.79
SDF4-205ENST00000465727 HSDL1Q3SXM5 330 aa20■□□□□ 0.79
SDF4-205ENST00000465727 GRAMD4Q6IC98 578 aa20■□□□□ 0.79
SDF4-205ENST00000465727 HACD2Q6Y1H2 254 aa20■□□□□ 0.79
SDF4-205ENST00000465727 GK5Q6ZS86 529 aa20■□□□□ 0.79
SDF4-205ENST00000465727 CAMK1DQ8IU85 385 aa20■□□□□ 0.79
SDF4-205ENST00000465727 CCDC185Q8N715 623 aa20■□□□□ 0.79
SDF4-205ENST00000465727 C12orf29Q8N999 325 aa20■□□□□ 0.79
SDF4-205ENST00000465727 DQX1Q8TE96 717 aaKnown RBP20■□□□□ 0.79
SDF4-205ENST00000465727 SEPT1Q8WYJ6 367 aa20■□□□□ 0.79
SDF4-205ENST00000465727 ITPKCQ96DU7 683 aa20■□□□□ 0.79
SDF4-205ENST00000465727 CASS4Q9NQ75 786 aa20■□□□□ 0.79
SDF4-205ENST00000465727 SNX9Q9Y5X1 595 aa20■□□□□ 0.79
SDF4-205ENST00000465727 TARM1B6A8C7 271 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 SDHDO14521 159 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 AKAP10O43572 662 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 C7P10643 843 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 DCKP27707 260 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 CCR10P46092 362 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 PSMD7P51665 324 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 RBP5P82980 135 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 TMEM132BQ14DG7 1078 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 FAM45BPQ6NSW5 357 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 ERMP1Q7Z2K6 904 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 PCDH20Q8N6Y1 951 aaKnown RBP19.99■□□□□ 0.79
SDF4-205ENST00000465727 FAM45AQ8TCE6 357 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 PPWD1Q96BP3 646 aaKnown RBP19.99■□□□□ 0.79
SDF4-205ENST00000465727 ZBED3Q96IU2 234 aaPredicted RBP19.99■□□□□ 0.79
SDF4-205ENST00000465727 FAR2Q96K12 515 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 SCYL1Q96KG9 808 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 C8orf4Q9NR00 106 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 SLC39A10Q9ULF5 831 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 PRORSD1PA6NEY8 169 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 TRIM64BA6NI03 449 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 SERPINB7O75635 380 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 BAIAP3O94812 1187 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 ATXN1P54253 815 aaKnown RBP19.99■□□□□ 0.79
SDF4-205ENST00000465727 TMEM62Q0P6H9 643 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 TGFBIQ15582 683 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 C1QTNF12Q5T7M4 302 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 REP15Q6BDI9 236 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 PIWIL4Q7Z3Z4 852 aaKnown RBP19.99■□□□□ 0.79
SDF4-205ENST00000465727 LRRC71Q8N4P6 559 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 DCUN1D5Q9BTE7 237 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 PAIP1Q9H074 479 aaKnown RBP19.99■□□□□ 0.79
SDF4-205ENST00000465727 CCDC68Q9H2F9 335 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 CXorf21Q9HAI6 301 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 MRM3Q9HC36 420 aaKnown RBP19.99■□□□□ 0.79
SDF4-205ENST00000465727 PFDN4Q9NQP4 134 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 SLC38A7Q9NVC3 462 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 NCKIPSDQ9NZQ3 722 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 SEPT10Q9P0V9 454 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 HES2Q9Y543 173 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 CROCCQ5TZA2 2017 aa19.99■□□□□ 0.79
SDF4-205ENST00000465727 DYTNA2CJ06 578 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 PLOD2O00469 737 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 POLD2P49005 469 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 BACE1P56817 501 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 C21orf59P57076 290 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 GSTM4Q03013 218 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 PRKCQQ04759 706 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 TMEM132DQ14C87 1099 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 DGKDQ16760 1214 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 KYAT1Q16773 422 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 C6orf10Q5SRN2 563 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 TREML2Q5T2D2 321 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 LRRC8EQ6NSJ5 796 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 DCDC5Q6ZRR9 648 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 PID1Q7Z2X4 250 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 LYSMD3Q7Z3D4 306 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 PTAR1Q7Z6K3 402 aaPredicted RBP19.98■□□□□ 0.79
SDF4-205ENST00000465727 CDR2LQ86X02 465 aaPredicted RBP19.98■□□□□ 0.79
SDF4-205ENST00000465727 ZNF786Q8N393 782 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 FSTL5Q8N475 847 aaPredicted RBP19.98■□□□□ 0.79
SDF4-205ENST00000465727 CCNYQ8ND76 341 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 SNX25Q9H3E2 840 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 RHOJQ9H4E5 214 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 RPF2Q9H7B2 306 aaKnown RBP19.98■□□□□ 0.79
SDF4-205ENST00000465727 ANLNQ9NQW6 1124 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 TMEM9Q9P0T7 183 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 TMEM181Q9P2C4 612 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 FZD10Q9ULW2 581 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 COQ6Q9Y2Z9 468 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 SOCS2O14508 198 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 GIPC1O14908 333 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 OCM2P0CE71 109 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 OCMP0CE72 109 aaPredicted RBP19.98■□□□□ 0.79
SDF4-205ENST00000465727 NPY2RP49146 381 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 CTBSQ01459 385 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 MBTD1Q05BQ5 628 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 DHFR2Q86XF0 187 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 AFAP1L2Q8N4X5 818 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 DNAAF3Q8N9W5 541 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 OR2T34Q8NGX1 318 aa19.98■□□□□ 0.79
SDF4-205ENST00000465727 OR2T3Q8NH03 318 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms