RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 LDB2O43679 373 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 ASNA1O43681 348 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 STRNO43815 780 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 FGF17O60258 216 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 TIPRLO75663 272 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 SOX30O94993 753 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 FAM90A15PP0C7V4 464 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 FAM90A14PP0C7W9 464 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 ZNF12P17014 697 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 ITGB8P26012 769 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 YWHAQP27348 245 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 IL15P40933 162 aaPredicted RBP2.58□□□□□ -2
NDUFA4-202ENST00000463308 LIFRP42702 1097 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 GPR12P47775 334 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 HSD17B4P51659 736 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 SF3A3Q12874 501 aaKnown RBP eCLIP2.58□□□□□ -2
NDUFA4-202ENST00000463308 DMP1Q13316 513 aaPredicted RBP2.58□□□□□ -2
NDUFA4-202ENST00000463308 ALKBH1Q13686 389 aaKnown RBP2.58□□□□□ -2
NDUFA4-202ENST00000463308 XKR9Q5GH70 373 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 ZNF772Q68DY9 489 aaPredicted RBP2.58□□□□□ -2
NDUFA4-202ENST00000463308 KIAA1324Q6UXG2 1013 aaKnown RBP2.58□□□□□ -2
NDUFA4-202ENST00000463308 SERPINA11Q86U17 422 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 GALNT15Q8N3T1 639 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 NEK9Q8TD19 979 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 TBC1D22AQ8WUA7 517 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 STYXQ8WUJ0 223 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 FAR1Q8WVX9 515 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 HMGB4Q8WW32 186 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 CADM1Q9BY67 442 aaKnown RBP2.58□□□□□ -2
NDUFA4-202ENST00000463308 TRIM31Q9BZY9 425 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 PKP3Q9Y446 797 aa2.58□□□□□ -2
NDUFA4-202ENST00000463308 IGLV5-52A0A0A0MRZ9 124 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 A0A0U1RQJ8 604 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 A0A1B0GVM2 712 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 EDIL3O43854 480 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 CH25HO95992 272 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 CETPP11597 493 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 CKMT1AP12532 417 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 GYS1P13807 737 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 GNALP38405 381 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 TECP42680 631 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 NEK3P51956 506 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 RCAN1P53805 252 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 ST3GAL1Q11201 340 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 MYBPHQ13203 477 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 HDAC1Q13547 482 aaPredicted RBP2.57□□□□□ -2
NDUFA4-202ENST00000463308 PKP1Q13835 747 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 ZNF284Q2VY69 593 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 BTBD16Q32M84 506 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 GXYLT1Q4G148 440 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 ATPAF1Q5TC12 328 aaPredicted RBP2.57□□□□□ -2
NDUFA4-202ENST00000463308 CCDC181Q5TID7 509 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 MTFR2Q6P444 385 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 FAM122CQ6P4D5 195 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 GGT6Q6P531 493 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 TMEM71Q6P5X7 295 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 ZNF449Q6P9G9 518 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 C9orf139Q6ZV77 190 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 SRLQ86TD4 932 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 OR1N1Q8NGS0 311 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 DEPTORQ8TB45 409 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 RSC1A1Q92681 617 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 TNIP3Q96KP6 325 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 SGCZQ96LD1 299 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 TEFMQ96QE5 360 aaKnown RBP2.57□□□□□ -2
NDUFA4-202ENST00000463308 NPAS1Q99742 590 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 DDX23Q9BUQ8 820 aaKnown RBP2.57□□□□□ -2
NDUFA4-202ENST00000463308 HDHD5Q9BXW7 423 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 EVA1AQ9H8M9 152 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 PDE11AQ9HCR9 933 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 OBP2BQ9NPH6 170 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 TMLHEQ9NVH6 421 aa2.57□□□□□ -2
NDUFA4-202ENST00000463308 GEMIN8Q9NWZ8 242 aaKnown RBP2.57□□□□□ -2
NDUFA4-202ENST00000463308 TAF1P21675 1872 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 GREB1LQ9C091 1923 aaPredicted RBP2.56□□□□□ -2
NDUFA4-202ENST00000463308 IGKV3D-20A0A0C4DH25 116 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 HSPB6O14558 160 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 GAGE7O76087 117 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 TNFRSF6BO95407 300 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 CRYAAP02489 173 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 TFRCP02786 760 aaKnown RBP2.56□□□□□ -2
NDUFA4-202ENST00000463308 GAGE12FP0CL80 117 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 GAGE12GP0CL81 117 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 GAGE12IP0CL82 117 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 PRPH2P23942 346 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 PPM1AP35813 382 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 KRTAP10-1P60331 282 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 GAGE1Q13065 139 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 GAGE4Q13068 117 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 PTK2BQ14289 1009 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 SPARCL1Q14515 664 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 STARD3Q14849 445 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 TRIM60Q495X7 471 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 AADACL2Q6P093 401 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 TUBA1AQ71U36 451 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 SH2D6Q7Z4S9 175 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 WDR5BQ86VZ2 330 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 SFR1Q86XK3 245 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 FAM186BQ8IYM0 893 aa2.56□□□□□ -2
NDUFA4-202ENST00000463308 CNBD1Q8NA66 436 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms