RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 EIF4G1Q04637 1599 aaKnown RBP3.14□□□□□ -1.91
HPS3-203ENST00000460822 C17orf113A0A1B0GUU1 675 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 FRMD3A2A2Y4 597 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 TTC34A8MYJ7 566 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 BTBD18B2RXH4 712 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 SH2B2O14492 632 aaPredicted RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 PEX1O43933 1283 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 NPSP0C0P6 89 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 HOXB9P17482 250 aaPredicted RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 CALRP27797 417 aaKnown RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 POU1F1P28069 291 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 CFHR3Q02985 330 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 FOXI1Q12951 378 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 PRPF4BQ13523 1007 aaKnown RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 FRG1Q14331 258 aaKnown RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 MFSD13AQ14CX5 517 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 PTPRRQ15256 657 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 CNGA3Q16281 694 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 CCDC92Q53HC0 331 aaPredicted RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 ARL13AQ5H913 290 aaPredicted RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 PLAC9Q5JTB6 97 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 C1orf141Q5JVX7 400 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 FBXO42Q6P3S6 717 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 CRELD2Q6UXH1 353 aaPredicted RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 RTL10Q7L3V2 364 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 ZSCAN30Q86W11 494 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 PRIMA1Q86XR5 153 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 GALNT13Q8IUC8 556 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 ARHGAP12Q8IWW6 846 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.13□□□□□ -1.91
HPS3-203ENST00000460822 GHDCQ8N2G8 530 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 GABPB2Q8TAK5 448 aaPredicted RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 HSPH1Q92598 858 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 FAM149B1Q96BN6 582 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 HS6ST2Q96MM7 605 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 GLIS2Q9BZE0 524 aaPredicted RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 FBRSL1Q9HCM7 1045 aaKnown RBP3.13□□□□□ -1.91
HPS3-203ENST00000460822 SNTG1Q9NSN8 517 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 TMEM248Q9NWD8 314 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 ASNSD1Q9NWL6 643 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 FRMD4BQ9Y2L6 1034 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 MAST3O60307 1309 aa3.13□□□□□ -1.91
HPS3-203ENST00000460822 WRNQ14191 1432 aaPredicted RBP eCLIP3.13□□□□□ -1.91
HPS3-203ENST00000460822 MCIDASD6RGH6 385 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 H0YIZ8 118 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 IFNL4K9M1U5 179 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 CLIC1O00299 241 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 UBE2CO00762 179 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ADAM20O43506 726 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 STRNO43815 780 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 PAGE4O60829 102 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ENTPD3O75355 529 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 CBX6O95503 412 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 EBLN1P0CF75 366 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 APEHP13798 732 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 CDH2P19022 906 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 SFPQP23246 707 aaKnown RBP eCLIP3.12□□□□□ -1.91
HPS3-203ENST00000460822 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 MPLP40238 635 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 VPS41P49754 854 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 CCDC142Q17RM4 750 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 DPCR1Q3MIW9 517 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 MOB3CQ70IA8 216 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ZNF551Q7Z340 670 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 TADA2BQ86TJ2 420 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 FAM160B2Q86V87 743 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 LINC00346Q8IVM7 164 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 SFTPA1Q8IWL2 248 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 LINC01465Q8N7H1 131 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ZNF713Q8N859 430 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 DNAAF1Q8NEP3 725 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 FAM110DQ8TAY7 271 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 POMGNT1Q8WZA1 660 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 VMP1Q96GC9 406 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ZNF764Q96H86 408 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 ABHD1Q96SE0 405 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 AIFM2Q9BRQ8 373 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ADPGKQ9BRR6 497 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ABHD14AQ9BUJ0 271 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 FSD1LQ9BXM9 530 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 CADM1Q9BY67 442 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 OR10A4Q9H209 315 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 NDST4Q9H3R1 872 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ADARB2Q9NS39 739 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.12□□□□□ -1.91
HPS3-203ENST00000460822 BABAM1Q9NWV8 329 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 DLL3Q9NYJ7 618 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 MRPL15Q9P015 296 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 SUCLA2Q9P2R7 463 aaPredicted RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 FBXO4Q9UKT5 387 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ADAMTS5Q9UNA0 930 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 SCRIBQ14160 1630 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 EIF3CLB5ME19 914 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 TP73O15350 636 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 MPPED1O15442 326 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 LIASO43766 372 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 ADAP00813 363 aa3.12□□□□□ -1.91
HPS3-203ENST00000460822 HSP90AB1P08238 724 aaKnown RBP3.12□□□□□ -1.91
HPS3-203ENST00000460822 RFPL3SP0C7P2 107 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms