RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 AP4E1Q9UPM8 1137 aa16.8■□□□□ 0.28
SHANK2-213ENST00000460048 WASF3Q9UPY6 502 aa16.8■□□□□ 0.28
SHANK2-213ENST00000460048 ANKRD36A6QL64 1941 aa16.8■□□□□ 0.28
SHANK2-213ENST00000460048 SPAARA0A1B0GVQ0 90 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 EIF3CLB5ME19 914 aaKnown RBP16.79■□□□□ 0.28
SHANK2-213ENST00000460048 FGF10O15520 208 aaPredicted RBP16.79■□□□□ 0.28
SHANK2-213ENST00000460048 CBFA2T3O75081 653 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 CD38P28907 300 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 NUDT1P36639 197 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 CCDC15Q0P6D6 951 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 CA9Q16790 459 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 ERMARDQ5T6L9 678 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 NAPEPLDQ6IQ20 393 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 NEK5Q6P3R8 708 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 ERN2Q76MJ5 926 aaKnown RBP16.79■□□□□ 0.28
SHANK2-213ENST00000460048 GRIN3AQ8TCU5 1115 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 SERAC1Q96JX3 654 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 EIF3CQ99613 913 aaKnown RBP16.79■□□□□ 0.28
SHANK2-213ENST00000460048 SNRNP25Q9BV90 132 aaKnown RBP16.79■□□□□ 0.28
SHANK2-213ENST00000460048 TM6SF2Q9BZW4 377 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 XPO4Q9C0E2 1151 aaKnown RBP16.79■□□□□ 0.28
SHANK2-213ENST00000460048 KLC2Q9H0B6 622 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 MRPL47Q9HD33 250 aaKnown RBP16.79■□□□□ 0.28
SHANK2-213ENST00000460048 AASDHPPTQ9NRN7 309 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 MYO1AQ9UBC5 1043 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 DMTF1Q9Y222 760 aa16.79■□□□□ 0.28
SHANK2-213ENST00000460048 LUC7L2Q9Y383 392 aaKnown RBP16.79■□□□□ 0.28
SHANK2-213ENST00000460048 ZSCAN5CA6NGD5 496 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-213ENST00000460048 RASA4BC9J798 803 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 H0Y8X5 98 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 KCNK3O14649 394 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 RASA4O43374 803 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 RNGTTO60942 597 aaKnown RBP16.78■□□□□ 0.28
SHANK2-213ENST00000460048 LRCH4O75427 683 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 RNF8O76064 485 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 GSRP00390 522 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 MIPP30301 263 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 MAT2AP31153 395 aaKnown RBP16.78■□□□□ 0.28
SHANK2-213ENST00000460048 DNA2P51530 1060 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 C21orf59P57076 290 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 TPI1P60174 286 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 SIM1P81133 766 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-213ENST00000460048 SERINC3Q13530 473 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 PARP15Q460N3 678 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 LEKR1Q6ZMV7 388 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 OR2AP1Q8NGE2 309 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 BAHD1Q8TBE0 780 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-213ENST00000460048 CASKIN2Q8WXE0 1202 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 SKA1Q96BD8 255 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 HMCESQ96FZ2 354 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 PPP1R16AQ96I34 528 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 CNTNAP3BQ96NU0 1288 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 CNTNAP3Q9BZ76 1288 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 DHX35Q9H5Z1 703 aaKnown RBP16.78■□□□□ 0.28
SHANK2-213ENST00000460048 DYRK4Q9NR20 520 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 HECAQ9UBI9 543 aaPredicted RBP16.78■□□□□ 0.28
SHANK2-213ENST00000460048 PCSK1NQ9UHG2 260 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 PCOLCE2Q9UKZ9 415 aa16.78■□□□□ 0.28
SHANK2-213ENST00000460048 COL5A1P20908 1838 aaPredicted RBP16.77■□□□□ 0.28
SHANK2-213ENST00000460048 A0A087X0T9 212 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 BUB1O43683 1085 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 DFNA5O60443 496 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 TMCC1O94876 653 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 FAM228BP0C875 321 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 ITGB7P26010 798 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 CASP14P31944 242 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 NEK3P51956 506 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 SNRPD1P62314 119 aaKnown RBP16.77■□□□□ 0.28
SHANK2-213ENST00000460048 ACAP1Q15027 740 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 TRIP6Q15654 476 aaKnown RBP16.77■□□□□ 0.28
SHANK2-213ENST00000460048 INO80DQ53TQ3 878 aaPredicted RBP16.77■□□□□ 0.28
SHANK2-213ENST00000460048 VPS36Q86VN1 386 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 PSTKQ8IV42 348 aaKnown RBP16.77■□□□□ 0.28
SHANK2-213ENST00000460048 MFSD2AQ8NA29 543 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 LRIG1Q96JA1 1093 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 KCTD15Q96SI1 283 aaPredicted RBP16.77■□□□□ 0.28
SHANK2-213ENST00000460048 NCAPGQ9BPX3 1015 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.77■□□□□ 0.28
SHANK2-213ENST00000460048 ZDHHC6Q9H6R6 413 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 LRRC19Q9H756 370 aa16.77■□□□□ 0.28
SHANK2-213ENST00000460048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.77■□□□□ 0.28
SHANK2-213ENST00000460048 LRRK1Q38SD2 2015 aa16.77■□□□□ 0.27
SHANK2-213ENST00000460048 PTPRBP23467 1997 aa16.77■□□□□ 0.27
SHANK2-213ENST00000460048 A0A1B0GTQ1 180 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 A0A1W2PQU0 124 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 EEF2KO00418 725 aaKnown RBP16.76■□□□□ 0.27
SHANK2-213ENST00000460048 FLRT2O43155 660 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 PRPSAP2O60256 369 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 PCDHGA12O60330 932 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 TOP3BO95985 862 aaKnown RBP16.76■□□□□ 0.27
SHANK2-213ENST00000460048 ADRB3P13945 408 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 HNRNPH3P31942 346 aaKnown RBP16.76■□□□□ 0.27
SHANK2-213ENST00000460048 GKP32189 559 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 PCK1P35558 622 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 CCT8P50990 548 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 NDST2P52849 883 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 FOXC1Q12948 553 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 SUZ12Q15022 739 aaKnown RBP16.76■□□□□ 0.27
SHANK2-213ENST00000460048 ZNF284Q2VY69 593 aa16.76■□□□□ 0.27
SHANK2-213ENST00000460048 SETMARQ53H47 684 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms