RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 IGSF6O95976 241 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 CFIP05156 583 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 SYPP08247 313 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3HP0C7X1 549 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TCF4P15884 667 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 AMPD1P23109 780 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 NUDT1P36639 197 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 CCR5P51681 352 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 CCNHP51946 323 aaPredicted RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 HADHBP55084 474 aaKnown RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 IL10RBQ08334 325 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 GRM3Q14832 879 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 SF3A2Q15428 464 aaKnown RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 MYLK3Q32MK0 819 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 LRRC38Q5VT99 294 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 AFMIDQ63HM1 303 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3GQ6DHY5 549 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TXNRD3NBQ6F5E7 133 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3CQ6IPX1 549 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TBC1D3Q8IZP1 549 aaPredicted RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 NSMCE1Q8WV22 266 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 SNX19Q92543 992 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 CELF6Q96J87 481 aaKnown RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 CALN1Q9BXU9 219 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 OSBPL1AQ9BXW6 950 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 KLC2Q9H0B6 622 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 MIR1-1HGQ9H1L0 117 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 C6orf106Q9H6K1 298 aaPredicted RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 SP110Q9HB58 689 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 TMEM74BQ9NUR3 256 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 CDV3Q9UKY7 258 aaKnown RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 SARDHQ9UL12 918 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.43■□□□□ 0.22
CD28-203ENST00000458610 SDK1Q7Z5N4 2213 aa16.43■□□□□ 0.22
CD28-203ENST00000458610 A0A0A6YYK5 440 aaPredicted RBP16.42■□□□□ 0.22
CD28-203ENST00000458610 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.42■□□□□ 0.22
CD28-203ENST00000458610 LEFTY1O75610 366 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 PALMO75781 387 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 CD27P26842 260 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 DRD3P35462 400 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 GJC1P36383 396 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 RENBPP51606 427 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 LIMK1P53667 647 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 ATXN3P54252 364 aaPredicted RBP16.42■□□□□ 0.22
CD28-203ENST00000458610 GSDMDP57764 484 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 CNTN1Q12860 1018 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 TEAD4Q15561 434 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 NEK5Q6P3R8 708 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 NCEH1Q6PIU2 408 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 ERN2Q76MJ5 926 aaKnown RBP16.42■□□□□ 0.22
CD28-203ENST00000458610 PRPF39Q86UA1 669 aaKnown RBP16.42■□□□□ 0.22
CD28-203ENST00000458610 RHOT1Q8IXI2 618 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 BBS5Q8N3I7 341 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 SPC24Q8NBT2 197 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 CHST14Q8NCH0 376 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 TSC1Q92574 1164 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 FAM131CQ96AQ9 280 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 SKA1Q96BD8 255 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 BIRC7Q96CA5 298 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 ZNF599Q96NL3 588 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 ZNF670Q9BS34 389 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 HDAC8Q9BY41 377 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 TM6SF2Q9BZW4 377 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 ZDHHC5Q9C0B5 715 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 DDX56Q9NY93 547 aaKnown RBP16.42■□□□□ 0.22
CD28-203ENST00000458610 EIF2B4Q9UI10 523 aaKnown RBP16.42■□□□□ 0.22
CD28-203ENST00000458610 IPO11Q9UI26 975 aaKnown RBP16.42■□□□□ 0.22
CD28-203ENST00000458610 WASF2Q9Y6W5 498 aa16.42■□□□□ 0.22
CD28-203ENST00000458610 SOWAHDA6NJG2 315 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 KRIT1O00522 736 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 BCAT2O15382 392 aaPredicted RBP16.41■□□□□ 0.22
CD28-203ENST00000458610 PLRG1O43660 514 aaKnown RBP16.41■□□□□ 0.22
CD28-203ENST00000458610 SPOPO43791 374 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 CTSLP07711 333 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 ITGB7P26010 798 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 MAOBP27338 520 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 ARSEP51690 589 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 ADPRHP54922 357 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 TAS2R40P59535 323 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 IRX4P78413 519 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 PUM1Q14671 1186 aaKnown RBP eCLIP16.41■□□□□ 0.22
CD28-203ENST00000458610 FBXL19Q6PCT2 694 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 LEKR1Q6ZMV7 388 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 VSIG1Q86XK7 387 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 GRIN3AQ8TCU5 1115 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 RAB7BQ96AH8 199 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 RTKNQ9BST9 563 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 MAK16Q9BXY0 300 aaKnown RBP16.41■□□□□ 0.22
CD28-203ENST00000458610 SMOC1Q9H4F8 434 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 ZDHHC6Q9H6R6 413 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 PREBQ9HCU5 417 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 HAUS2Q9NVX0 235 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 SERGEFQ9UGK8 458 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 MFHAS1Q9Y4C4 1052 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 ACTL7AQ9Y615 435 aa16.41■□□□□ 0.22
CD28-203ENST00000458610 ZNF487B1APH4 448 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 J3KR12 359 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 KDELR1P24390 212 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 IL4RP24394 825 aa16.4■□□□□ 0.22
CD28-203ENST00000458610 HSPA9P38646 679 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms