RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 BNIPLQ7Z465 357 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 ISG20Q96AZ6 181 aaKnown RBP21.96■■□□□ 1.11
CPNE1-220ENST00000458038 TUBGCP2Q9BSJ2 902 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 TNKS2Q9H2K2 1166 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 ATP13A1Q9HD20 1204 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 FZD3Q9NPG1 666 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 NCKIPSDQ9NZQ3 722 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 ZNF212Q9UDV6 495 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 CHD5Q8TDI0 1954 aa21.96■■□□□ 1.11
CPNE1-220ENST00000458038 OPA1O60313 960 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 ZNF821O75541 412 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-220ENST00000458038 ZMPSTE24O75844 475 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 PNMA6AP0CW24 399 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-220ENST00000458038 GNA12Q03113 381 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 C19orf57Q0VDD7 668 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 CARD16Q5EG05 197 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 CDCP2Q5VXM1 449 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 SEL1L3Q68CR1 1132 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 DPY19L2P1Q6NXN4 242 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 KYAT3Q6YP21 454 aaKnown RBP21.95■■□□□ 1.1
CPNE1-220ENST00000458038 KDM7AQ6ZMT4 941 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 OR7D4Q8NG98 312 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 RAB7BQ96AH8 199 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 ZNF578Q96N58 590 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-220ENST00000458038 LENG8Q96PV6 779 aaPredicted RBP21.95■■□□□ 1.1
CPNE1-220ENST00000458038 DEPDC7Q96QD5 511 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 GPR27Q9NS67 375 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 TMEM59LQ9UK28 342 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 FADS3Q9Y5Q0 445 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 SNX10Q9Y5X0 201 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 CSNK1G3Q9Y6M4 447 aa21.95■■□□□ 1.1
CPNE1-220ENST00000458038 H3BM21 787 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 ATXN7O15265 892 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-220ENST00000458038 FFAR2O15552 330 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 ENDOD1O94919 500 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 GIMD1P0DJR0 217 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 FLT3P36888 993 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 RABIFP47224 123 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 CLDN2P57739 230 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 SGCGQ13326 291 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 MIIPQ5JXC2 388 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 KLHDC7AQ5VTJ3 777 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 TMC6Q7Z403 805 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 PTAR1Q7Z6K3 402 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-220ENST00000458038 SLC22A18ASQ8N1D0 253 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 ASB12Q8WXK4 309 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 BMFQ96LC9 184 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 APOLD1Q96LR9 279 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 FCRL3Q96P31 734 aaPredicted RBP21.94■■□□□ 1.1
CPNE1-220ENST00000458038 ABCG4Q9H172 646 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 DNAJC28Q9NX36 388 aa21.94■■□□□ 1.1
CPNE1-220ENST00000458038 SPTY2D1-AS1A0A0U1RR47 76 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 TEX51A0A1B0GUA7 166 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 TSPAN6O43657 245 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 PAK4O96013 591 aaPredicted RBP21.93■■□□□ 1.1
CPNE1-220ENST00000458038 CSF2P04141 144 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 ERCC5P28715 1186 aaPredicted RBP21.93■■□□□ 1.1
CPNE1-220ENST00000458038 DNA2P51530 1060 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 CCNHP51946 323 aaPredicted RBP21.93■■□□□ 1.1
CPNE1-220ENST00000458038 NRG1Q02297 640 aaPredicted RBP21.93■■□□□ 1.1
CPNE1-220ENST00000458038 MAPK8IP2Q13387 824 aaPredicted RBP21.93■■□□□ 1.1
CPNE1-220ENST00000458038 ARL13BQ3SXY8 428 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 ARTNQ5T4W7 220 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 GPR155Q7Z3F1 870 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 ZNF248Q8NDW4 579 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 SLC39A7Q92504 469 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 GRAMD1AQ96CP6 724 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 ARHGEF26Q96DR7 871 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 C1QTNF2Q9BXJ5 285 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 DACH1Q9UI36 760 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 HPCAL4Q9UM19 191 aa21.93■■□□□ 1.1
CPNE1-220ENST00000458038 K7ESM1 405 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 FPGTO14772 594 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 DXOO77932 396 aaKnown RBP21.92■■□□□ 1.1
CPNE1-220ENST00000458038 UCHL3P15374 230 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 NME1P15531 152 aaKnown RBP21.92■■□□□ 1.1
CPNE1-220ENST00000458038 FZD2Q14332 565 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 ZCCHC8Q6NZY4 707 aaKnown RBP21.92■■□□□ 1.1
CPNE1-220ENST00000458038 PARGQ86W56 976 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 FAM131BQ86XD5 332 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 ZNF677Q86XU0 584 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 CFAP57Q96MR6 1250 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 NAA15Q9BXJ9 866 aaKnown RBP21.92■■□□□ 1.1
CPNE1-220ENST00000458038 STK33Q9BYT3 514 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 TMPRSS4Q9NRS4 437 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 HECAQ9UBI9 543 aaPredicted RBP21.92■■□□□ 1.1
CPNE1-220ENST00000458038 OR12D3Q9UGF7 316 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 IPO11Q9UI26 975 aaKnown RBP21.92■■□□□ 1.1
CPNE1-220ENST00000458038 RAI2Q9Y5P3 530 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 FHOD1Q9Y613 1164 aa21.92■■□□□ 1.1
CPNE1-220ENST00000458038 POM121BA6NF01 834 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 GOLGA8SH3BPF8 625 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 RNF103O00237 685 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 LZTS3O60299 673 aaPredicted RBP21.91■■□□□ 1.1
CPNE1-220ENST00000458038 LSSP48449 732 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 MAPKAPK2P49137 400 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 UCNP55089 124 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 PCBP4P57723 403 aaKnown RBP21.91■■□□□ 1.1
CPNE1-220ENST00000458038 ERVPABLB-1P60509 514 aa21.91■■□□□ 1.1
CPNE1-220ENST00000458038 ARF5P84085 180 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms