RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SPASTQ9UBP0 616 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 FPGTO14772 594 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 SPINT1O43278 529 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 MED7O43513 233 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 ENDOD1O94919 500 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 CLCN6P51797 869 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 GCNT1Q02742 428 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 NME3Q13232 169 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 PDCLQ13371 301 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 DPY19L3Q6ZPD9 716 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 C14orf80Q86SX3 495 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 JAMLQ86YT9 394 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 SLC35F3Q8IY50 421 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 LMO3Q8TAP4 145 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 SGF29Q96ES7 293 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 SIK2Q9H0K1 926 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 STARD5Q9NSY2 213 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 RMND1Q9NWS8 449 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 APOBEC3BQ9UH17 382 aaKnown RBP23.71■■□□□ 1.39
PTPRA-208ENST00000455631 FADS3Q9Y5Q0 445 aa23.71■■□□□ 1.39
PTPRA-208ENST00000455631 PLD2O14939 933 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 PAGE1O75459 146 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 CNTN5O94779 1100 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 ZNF202O95125 648 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 LETM1O95202 739 aaPredicted RBP23.7■■□□□ 1.38
PTPRA-208ENST00000455631 SLC5A2P31639 672 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 KRT85P78386 507 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 LRRC63Q05C16 580 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 EIF2B5Q13144 721 aaKnown RBP23.7■■□□□ 1.38
PTPRA-208ENST00000455631 SRSF6Q13247 344 aaKnown RBP23.7■■□□□ 1.38
PTPRA-208ENST00000455631 MTA1Q13330 715 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 PNOCQ13519 176 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 PRRT3Q5FWE3 981 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 LURAP1LQ8IV03 231 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 DCAF4L2Q8NA75 395 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 BTN2A2Q8WVV5 523 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 CCDC34Q96HJ3 373 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 SLC2A13Q96QE2 648 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 TCEAL2Q9H3H9 227 aaPredicted RBP23.7■■□□□ 1.38
PTPRA-208ENST00000455631 EPB41L5Q9HCM4 733 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 WASF2Q9Y6W5 498 aa23.7■■□□□ 1.38
PTPRA-208ENST00000455631 BOD1L1Q8NFC6 3051 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 PMM2O15305 246 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 GRAP2O75791 330 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 FAM87AP0C7U9 286 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 ITGB7P26010 798 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 SGCGQ13326 291 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 C1orf61Q13536 156 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 TGIF1Q15583 401 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 MEA1Q16626 185 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 CCDC40Q4G0X9 1142 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 ALFQ53S48 1182 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 ZNF658Q5TYW1 1059 aaPredicted RBP23.69■■□□□ 1.38
PTPRA-208ENST00000455631 XKR5Q6UX68 686 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 LIN37Q96GY3 246 aaPredicted RBP23.69■■□□□ 1.38
PTPRA-208ENST00000455631 KREMEN1Q96MU8 473 aa23.69■■□□□ 1.38
PTPRA-208ENST00000455631 THAP12O43422 761 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 HSF2BPO75031 334 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 GCATO75600 419 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 ADCY5O95622 1261 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 ITGB2P05107 769 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 ANXA6P08133 673 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 ADKP55263 362 aaKnown RBP23.68■■□□□ 1.38
PTPRA-208ENST00000455631 C5orf22Q49AR2 442 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 B3GNT8Q7Z7M8 397 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 PHACTR4Q8IZ21 702 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 FBXO39Q8N4B4 442 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 KLF6Q99612 283 aaPredicted RBP23.68■■□□□ 1.38
PTPRA-208ENST00000455631 PCDHGA7Q9Y5G6 932 aa23.68■■□□□ 1.38
PTPRA-208ENST00000455631 A0A0D9SEW6 157 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 IGLON5A6NGN9 336 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 SUV39H1O43463 412 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 GLI1P08151 1106 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 L1CAMP32004 1257 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 THOP1P52888 689 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 EIF3IQ13347 325 aaKnown RBP23.67■■□□□ 1.38
PTPRA-208ENST00000455631 COBLL1Q53SF7 1204 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 ESRP1Q6NXG1 681 aaKnown RBP23.67■■□□□ 1.38
PTPRA-208ENST00000455631 ZNF574Q6ZN55 896 aaPredicted RBP23.67■■□□□ 1.38
PTPRA-208ENST00000455631 PARS2Q7L3T8 475 aaKnown RBP23.67■■□□□ 1.38
PTPRA-208ENST00000455631 RAB11FIP2Q7L804 512 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 ZNF606Q8WXB4 792 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 PPP1R13BQ96KQ4 1090 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 LENG8Q96PV6 779 aaPredicted RBP23.67■■□□□ 1.38
PTPRA-208ENST00000455631 LRRC61Q9BV99 259 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 SRRTQ9BXP5 876 aaKnown RBP23.67■■□□□ 1.38
PTPRA-208ENST00000455631 PADI4Q9UM07 663 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 CNTN6Q9UQ52 1028 aa23.67■■□□□ 1.38
PTPRA-208ENST00000455631 A0A1W2PQ27 194 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 A0A1W2PQ64 194 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 LMO7DNF2Z398 122 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 NTN3O00634 580 aaPredicted RBP23.66■■□□□ 1.38
PTPRA-208ENST00000455631 P4HA2O15460 535 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 AP1G1O43747 822 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 ITGB6P18564 788 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 GNA15P30679 374 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 UGT1A5P35504 534 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 DNA2P51530 1060 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 PFN3P60673 137 aa23.66■■□□□ 1.38
PTPRA-208ENST00000455631 EFHC1Q5JVL4 640 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms