RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 MMP2P08253 660 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 CHRM1P11229 460 aaPredicted RBP16.93■□□□□ 0.3
LINC00963-208ENST00000454968 NFKB1P19838 968 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 PSMB4P28070 264 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 VPS41P49754 854 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 CDK16Q00536 496 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 IHHQ14623 411 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 RALGPS1Q5JS13 557 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 IZUMO3Q5VZ72 239 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 MBLAC2Q68D91 279 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 GRAMD4Q6IC98 578 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 ZNF354CQ86Y25 554 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 SUGP1Q8IWZ8 645 aaKnown RBP16.93■□□□□ 0.3
LINC00963-208ENST00000454968 PPIL6Q8IXY8 311 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 PLPP6Q8IY26 295 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 SH2D3CQ8N5H7 860 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 PRCCQ92733 491 aaPredicted RBP16.93■□□□□ 0.3
LINC00963-208ENST00000454968 EXOC4Q96A65 974 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 VOPP1Q96AW1 172 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 HINFPQ9BQA5 517 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 TRIM31Q9BZY9 425 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 CEP44Q9C0F1 390 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 DPH5Q9H2P9 285 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 PRDM6Q9NQX0 595 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 LHX3Q9UBR4 397 aa16.93■□□□□ 0.3
LINC00963-208ENST00000454968 C19orf67A6NJJ6 358 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 PRRT4C9JH25 899 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 ATP9BO43861 1147 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 TMEM63AO94886 807 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 SUN1O94901 812 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 SRPRAP08240 638 aaKnown RBP16.92■□□□□ 0.3
LINC00963-208ENST00000454968 MYBL2P10244 700 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 SRCP12931 536 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 GLULP15104 373 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 CES1P23141 567 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 CTSOP43234 321 aaPredicted RBP16.92■□□□□ 0.3
LINC00963-208ENST00000454968 CSNK1DP48730 415 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 ITGA8P53708 1063 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 ECT2LQ008S8 904 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 PTPRNQ16849 979 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 PREPLQ4J6C6 727 aaPredicted RBP16.92■□□□□ 0.3
LINC00963-208ENST00000454968 LINGO4Q6UY18 593 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 PRPF39Q86UA1 669 aaKnown RBP16.92■□□□□ 0.3
LINC00963-208ENST00000454968 ADHFE1Q8IWW8 467 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 BBS5Q8N3I7 341 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 TSEN2Q8NCE0 465 aaKnown RBP16.92■□□□□ 0.3
LINC00963-208ENST00000454968 MCUQ8NE86 351 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 FBXO25Q8TCJ0 367 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 USP33Q8TEY7 942 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 OXNAD1Q96HP4 312 aaPredicted RBP16.92■□□□□ 0.3
LINC00963-208ENST00000454968 MLPHQ9BV36 600 aaPredicted RBP16.92■□□□□ 0.3
LINC00963-208ENST00000454968 PHACTR1Q9C0D0 580 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 POLR1EQ9GZS1 481 aaKnown RBP16.92■□□□□ 0.3
LINC00963-208ENST00000454968 NEUROG2Q9H2A3 272 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 VPS45Q9NRW7 570 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 RSPH14Q9UHP6 348 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 STARD13Q9Y3M8 1113 aa16.92■□□□□ 0.3
LINC00963-208ENST00000454968 UQCRHLA0A096LP55 91 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 TCRBV7S3A2A0A539 114 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 SHISA7A6NL88 538 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 SMAD6O43541 496 aaKnown RBP16.91■□□□□ 0.3
LINC00963-208ENST00000454968 UQCRHP07919 91 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 DLDP09622 509 aaKnown RBP16.91■□□□□ 0.3
LINC00963-208ENST00000454968 CTHP32929 405 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 ZP2Q05996 745 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 NIPAL4Q0D2K0 466 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 CALCOCO2Q13137 446 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 ANKRD22Q5VYY1 191 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 NAIF1Q69YI7 327 aaPredicted RBP16.91■□□□□ 0.3
LINC00963-208ENST00000454968 LEKR1Q6ZMV7 388 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 RALGPS2Q86X27 583 aaPredicted RBP16.91■□□□□ 0.3
LINC00963-208ENST00000454968 MSANTD3Q96H12 275 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 FOXP3Q9BZS1 431 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 C8orf33Q9H7E9 229 aaPredicted RBP16.91■□□□□ 0.3
LINC00963-208ENST00000454968 NT5MQ9NPB1 228 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 HAUS2Q9NVX0 235 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 ELOVL2Q9NXB9 296 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 TCF20Q9UGU0 1960 aaKnown RBP16.91■□□□□ 0.3
LINC00963-208ENST00000454968 CKAP5Q14008 2032 aa16.91■□□□□ 0.3
LINC00963-208ENST00000454968 CCDC151A5D8V7 595 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 K7ERQ8 282 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 ANXA9O76027 345 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 AP2A1O95782 977 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 ATP5BP06576 529 aaKnown RBP16.9■□□□□ 0.3
LINC00963-208ENST00000454968 SRFP11831 508 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 H2AFXP16104 143 aaPredicted RBP16.9■□□□□ 0.3
LINC00963-208ENST00000454968 POLR2EP19388 210 aaKnown RBP16.9■□□□□ 0.3
LINC00963-208ENST00000454968 GRIA2P42262 883 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 MAGEA3P43357 314 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 RGRP47804 291 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 TDGQ13569 410 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 ENPP2Q13822 863 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 ZNF235Q14590 738 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 KDELC1Q6UW63 502 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 ZNF534Q76KX8 674 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 CSGALNACT1Q8TDX6 532 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 FRS2Q8WU20 508 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 NSMCE3Q96MG7 304 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 NUDCD1Q96RS6 583 aa16.9■□□□□ 0.3
LINC00963-208ENST00000454968 CINPQ9BW66 212 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms