RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SH2D4BQ5SQS7 431 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 TEDDM1Q5T9Z0 273 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 CES4AQ5XG92 561 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 FAM219BQ5XKK7 198 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 LINC00523Q86TU6 105 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 SNX32Q86XE0 403 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 ZSCAN18Q8TBC5 510 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-213ENST00000454468 OLFM3Q96PB7 478 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 GLOD4Q9HC38 313 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 KCTD3Q9Y597 815 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 AK5Q9Y6K8 562 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 C9JVG2 144 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 CBX4O00257 560 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 AURKAO14965 403 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 SIN3BO75182 1162 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 PSMG1O95456 288 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 HLA-DQB2P05538 268 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 SKIP12755 728 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 RPL9P32969 192 aaKnown RBP12.14□□□□□ -0.47
SMPD4-213ENST00000454468 SKIV2L2P42285 1042 aaKnown RBP12.14□□□□□ -0.47
SMPD4-213ENST00000454468 CCNHP51946 323 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-213ENST00000454468 SLC18A1P54219 525 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 GEMP55040 296 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 SLC10A7Q0GE19 358 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 PCLAFQ15004 111 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 TRIP10Q15642 601 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 KIF19Q2TAC6 998 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 SLC9B1Q4ZJI4 515 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 ARL13AQ5H913 290 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-213ENST00000454468 DDIASQ8IXT1 998 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 RTP4Q96DX8 246 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 ACBD6Q9BR61 282 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 RCOR3Q9P2K3 495 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-213ENST00000454468 FAM8A1Q9UBU6 413 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 FAM50BQ9Y247 325 aa12.14□□□□□ -0.47
SMPD4-213ENST00000454468 DDHD2O94830 711 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 AHSGP02765 367 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 CCDC166P0CW27 439 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 TPBGLP0DKB5 382 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 MLNP12872 115 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 CSE1LP55060 971 aaKnown RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 PPIDQ08752 370 aaKnown RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 ANO4Q32M45 955 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 FSCBQ5H9T9 825 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SEL1L3Q68CR1 1132 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 TMEM154Q6P9G4 183 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 DCLRE1AQ6PJP8 1040 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 CNSTQ6PJW8 725 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 MARK2Q7KZI7 788 aaKnown RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SPATA24Q86W54 205 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 HPS6Q86YV9 775 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 ULK2Q8IYT8 1036 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SHKBP1Q8TBC3 707 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 KCTD13Q8WZ19 329 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 HDAC10Q969S8 669 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 ZCWPW1Q9H0M4 648 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 UXTQ9UBK9 157 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SSX2IPQ9Y2D8 614 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SLC45A1Q9Y2W3 748 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 ACTL7AQ9Y615 435 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 GABRDO14764 452 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SEPT4O43236 478 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 GFAPP14136 432 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 GRK2P25098 689 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 YWHAQP27348 245 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 NPY2RP49146 381 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 LIMK2P53671 638 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 AP2B1P63010 937 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 PLIN5Q00G26 463 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SREBF2Q12772 1141 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 RIPK1Q13546 671 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 PAFAH1B3Q15102 231 aaKnown RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 KLC3Q6P597 504 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 C17orf99Q6UX52 265 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 LGI2Q8N0V4 545 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 HMCESQ96FZ2 354 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 C7orf26Q96N11 449 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 OR52B2Q96RD2 323 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SH3GL3Q99963 347 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SEMA3CQ99985 751 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 ALG9Q9H6U8 611 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 PNPLA8Q9NP80 782 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 IGSF9Q9P2J2 1179 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 MCM8Q9UJA3 840 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 FBXO5Q9UKT4 447 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 SOX13Q9UN79 622 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 PCDHB7Q9Y5E2 793 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 A0A0U1RQF3 1178 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 TBKBP1A7MCY6 615 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 ERI2A8K979 691 aaKnown RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 IRAK2O43187 625 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 GJB3O75712 270 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 KLHL2O95198 593 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 FGF3P11487 239 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 CTGFP29279 349 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 TAS2R39P59534 338 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 TBL3Q12788 808 aaKnown RBP12.13□□□□□ -0.47
SMPD4-213ENST00000454468 TWF1Q12792 350 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 GRIK3Q13003 919 aa12.13□□□□□ -0.47
SMPD4-213ENST00000454468 POLD3Q15054 466 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms