RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 NCKIPSDQ9NZQ3 722 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 AJAP1Q9UKB5 411 aaPredicted RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 ZFR2Q9UPR6 939 aaKnown RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
USP1-204ENST00000452143 COL27A1Q8IZC6 1860 aaPredicted RBP11.12□□□□□ -0.63
USP1-204ENST00000452143 H3BM21 787 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 FOXN3O00409 490 aaPredicted RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 SCAMP1O15126 338 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 FFAR2O15552 330 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 AP1G1O43747 822 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 LZTS3O60299 673 aaPredicted RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 GADD45BO75293 160 aaPredicted RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 LEFTY1O75610 366 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 DXOO77932 396 aaKnown RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 PCDH8O95206 1070 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 GIMD1P0DJR0 217 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 ADRB3P13945 408 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 NME1P15531 152 aaKnown RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 CYP11B1P15538 503 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 TFE3P19532 575 aaPredicted RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 ETFBP38117 255 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 DUSP3P51452 185 aaPredicted RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 PCBP4P57723 403 aaKnown RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 RNASE9P60153 205 aaKnown RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 RPS21P63220 83 aaKnown RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 TLE3Q04726 772 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 C19orf57Q0VDD7 668 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 ARSIQ5FYB1 569 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 CDCP2Q5VXM1 449 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 SEL1L3Q68CR1 1132 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 KDM7AQ6ZMT4 941 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 BNIPLQ7Z465 357 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 PTAR1Q7Z6K3 402 aaPredicted RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 PARGQ86W56 976 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 LSMEM2Q8N112 164 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 FAM181AQ8N9Y4 354 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 MLKLQ8NB16 471 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 CHST14Q8NCH0 376 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 ZNF248Q8NDW4 579 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 KLK6Q92876 244 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 TBCBQ99426 244 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 SLC17A9Q9BYT1 436 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 ZYG11BQ9C0D3 744 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 TNKS2Q9H2K2 1166 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 RETREG1Q9H6L5 497 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 ATP13A1Q9HD20 1204 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 PLCB1Q9NQ66 1216 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 MPP6Q9NZW5 540 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
USP1-204ENST00000452143 ZNF212Q9UDV6 495 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 HS3ST3A1Q9Y663 406 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 WASF2Q9Y6W5 498 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 COL6A6A6NMZ7 2263 aa11.11□□□□□ -0.63
USP1-204ENST00000452143 OPA1O60313 960 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 ZNF821O75541 412 aaPredicted RBP11.1□□□□□ -0.63
USP1-204ENST00000452143 ZMPSTE24O75844 475 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 CSF2P04141 144 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 PNMA6AP0CW24 399 aaPredicted RBP11.1□□□□□ -0.63
USP1-204ENST00000452143 L1CAMP32004 1257 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 FLT3P36888 993 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 RABIFP47224 123 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 CCNHP51946 323 aaPredicted RBP11.1□□□□□ -0.63
USP1-204ENST00000452143 GEMIN4P57678 1058 aaKnown RBP11.1□□□□□ -0.63
USP1-204ENST00000452143 CLDN2P57739 230 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 ARF5P84085 180 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 GNA12Q03113 381 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 TPD52L1Q16890 204 aaPredicted RBP11.1□□□□□ -0.63
USP1-204ENST00000452143 ZCCHC8Q6NZY4 707 aaKnown RBP11.1□□□□□ -0.63
USP1-204ENST00000452143 Q6ZSR6 202 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 GPR155Q7Z3F1 870 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 TMC6Q7Z403 805 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 XYLT1Q86Y38 959 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 SPACA3Q8IXA5 215 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 PLPP6Q8IY26 295 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 DENND6BQ8NEG7 585 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 ZNF548Q8NEK5 533 aaPredicted RBP11.1□□□□□ -0.63
USP1-204ENST00000452143 OR7D4Q8NG98 312 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 RAB7BQ96AH8 199 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 ISG20Q96AZ6 181 aaKnown RBP11.1□□□□□ -0.63
USP1-204ENST00000452143 ARHGEF26Q96DR7 871 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 APOLD1Q96LR9 279 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 ZNF578Q96N58 590 aaPredicted RBP11.1□□□□□ -0.63
USP1-204ENST00000452143 LGMNQ99538 433 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 HEPHQ9BQS7 1158 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 NDST4Q9H3R1 872 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 DNAJC28Q9NX36 388 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 PCDHB1Q9Y5F3 818 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 FADS3Q9Y5Q0 445 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 SNX10Q9Y5X0 201 aa11.1□□□□□ -0.63
USP1-204ENST00000452143 LY6G6EA0A0G2JKS1 128 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 SPTY2D1-AS1A0A0U1RR47 76 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 K7ESM1 405 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 RNF103O00237 685 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 TSPAN6O43657 245 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 SRGAP2O75044 1071 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 UCNP55089 124 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 ERVPABLB-1P60509 514 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 UBE2HP62256 183 aa11.09□□□□□ -0.63
USP1-204ENST00000452143 NRG1Q02297 640 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms