RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 GJB3O75712 270 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 TOP3BO95985 862 aaKnown RBP17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 IGHV4-34P06331 123 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 COMTP21964 271 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 AIF1P55008 147 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 FAM193AP78312 1265 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 SFSWAPQ12872 951 aaKnown RBP17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 ELAVL3Q14576 367 aaKnown RBP17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 POM121L1PQ3SYA9 428 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 LINGO4Q6UY18 593 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 Q6ZVU0 165 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 SLFN11Q7Z7L1 901 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 SH2D3CQ8N5H7 860 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 OR7D4Q8NG98 312 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 HAPLN3Q96S86 360 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 GAREM1Q9H706 876 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 TM9SF3Q9HD45 589 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 ANGPTL2Q9UKU9 493 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 SARDHQ9UL12 918 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 CAPN6Q9Y6Q1 641 aa17.41■□□□□ 0.38
PRPF40A-204ENST00000450303 IGLV3-10A0A075B6K4 115 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 K7ERQ8 282 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 KCNK3O14649 394 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 ATP9BO43861 1147 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 SH3BP5O60239 455 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 LRCH4O75427 683 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 ADH1BP00325 375 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 KRT7P08729 469 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 SRCP12931 536 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 GOT1P17174 413 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 SPINK2P20155 84 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 C5AR1P21730 350 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 GLDCP23378 1020 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 CD27P26842 260 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 OR1E1P30953 314 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 HDAC4P56524 1084 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 GNG11P61952 73 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 HLA-BQ31612 363 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 BOLA3Q53S33 107 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 ODF2Q5BJF6 829 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 SETD3Q86TU7 594 aaPredicted RBP17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 RHOT1Q8IXI2 618 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 LRRC57Q8N9N7 239 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 ATP11CQ8NB49 1132 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 OR14C36Q8NHC7 312 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 OR8D1Q8WZ84 308 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 ORAI3Q9BRQ5 295 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 SPON2Q9BUD6 331 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 ZDHHC5Q9C0B5 715 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 EBF2Q9HAK2 575 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 VPS51Q9UID3 782 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 SNX11Q9Y5W9 270 aa17.4■□□□□ 0.38
PRPF40A-204ENST00000450303 LRRC72A6NJI9 287 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 MIF4GDA9UHW6 222 aaKnown RBP17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 UPK3BL1B0FP48 263 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 UPK3BL2E5RIL1 263 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 SMAD6O43541 496 aaKnown RBP17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 MIPP30301 263 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 ADRA1BP35368 520 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 DRD3P35462 400 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 AFF3P51826 1226 aaKnown RBP17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 SIM1P81133 766 aaPredicted RBP17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 KIF19Q2TAC6 998 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 ZFYVE27Q5T4F4 411 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 C6orf118Q5T5N4 469 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 ACBD5Q5T8D3 534 aaPredicted RBP17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 SYT10Q6XYQ8 523 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 UBL4BQ8N7F7 174 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 OR2T34Q8NGX1 318 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 C2orf49Q9BVC5 232 aaPredicted RBP17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 ZYG11BQ9C0D3 744 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 PCSK1NQ9UHG2 260 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 FZD4Q9ULV1 537 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 FNDC3AQ9Y2H6 1198 aaKnown RBP17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 DOCK9Q9BZ29 2069 aa17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 TPRP12270 2363 aaKnown RBP17.39■□□□□ 0.37
PRPF40A-204ENST00000450303 TBC1D3DA0A087WVF3 549 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TBC1D3IA0A087WXS9 549 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TBC1D3EA0A087X179 549 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TBC1D3KA0A087X1G2 549 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 CCDC66A2RUB6 948 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TBC1D3FA6NER0 549 aaPredicted RBP17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TBC1D3LB9A6J9 549 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 FAM72CH0Y354 149 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 CBX4O00257 560 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 CTIFO43310 598 aaKnown RBP17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 PSTPIP1O43586 416 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 SLU7O95391 586 aaKnown RBP17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TBC1D3HP0C7X1 549 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 CASQ1P31415 396 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 VASPP50552 380 aaPredicted RBP17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 ADPRHP54922 357 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TEAD4Q15561 434 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 KCNT1Q5JUK3 1230 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 ERMARDQ5T6L9 678 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 FAM72AQ5TYM5 149 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 LRRC38Q5VT99 294 aa17.38■□□□□ 0.37
PRPF40A-204ENST00000450303 TBC1D3GQ6DHY5 549 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms