RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 SUDS3Q9H7L9 328 aaPredicted RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 GPBP1L1Q9HC44 474 aaPredicted RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 VCX3AQ9NNX9 186 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 GDAP2Q9NXN4 497 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 MID2Q9UJV3 735 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 NRCAMQ92823 1304 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 SEPT6Q14141 434 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 KIAA0319Q5VV43 1072 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 METTL21CQ5VZV1 264 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 ARHGAP36Q6ZRI8 547 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 SNX31Q8N9S9 440 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 NAT14Q8WUY8 206 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 ISL2Q96A47 359 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 LENG1Q96BZ8 264 aaPredicted RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 FTHL17Q9BXU8 183 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 IL22Q9GZX6 179 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 CYP4F12Q9HCS2 524 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 DMAP1Q9NPF5 467 aaPredicted RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 OR12D3Q9UGF7 316 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 CPA4Q9UI42 421 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 GRID2O43424 1007 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 SNAI1O95863 264 aaPredicted RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 RPLP2P05387 115 aaKnown RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 SMIM10L2AP0DMW4 78 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 SMIM10L2BP0DMW5 78 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 CSE1LP55060 971 aaKnown RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 MS4A2Q01362 244 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 CEACAM7Q14002 265 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 ZNF792Q3KQV3 632 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 OGFRL1Q5TC84 451 aaPredicted RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 UGT2A3Q6UWM9 527 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 ZC3HC1Q86WB0 502 aaKnown RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 NXNL1Q96CM4 212 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 WDCPQ9H6R7 721 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 H2AFYO75367 372 aaKnown RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 DDHD2O94830 711 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 HNRNPLP14866 589 aaKnown RBP eCLIP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 XIAPP98170 497 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 CDH17Q12864 832 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 PRKAA1Q13131 559 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 MAP7D1Q3KQU3 841 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 SH2D4BQ5SQS7 431 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 C6orf52Q5T4I8 152 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 FAM219BQ5XKK7 198 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 ZNF280DQ6N043 979 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 LRRC8EQ6NSJ5 796 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 PCDH20Q8N6Y1 951 aaKnown RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 ELMO2Q96JJ3 720 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 SLC2A13Q96QE2 648 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 WDR6Q9NNW5 1121 aaKnown RBP11.48□□□□□ -0.57
SYVN1-204ENST00000449943 ETAA1Q9NY74 926 aa11.48□□□□□ -0.57
SYVN1-204ENST00000449943 CRCPO75575 148 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 FBXO21O94952 628 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 AHSGP02765 367 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 SBK3P0C264 359 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 NPY2RP49146 381 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 COG7P83436 770 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 KCTD11Q693B1 232 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 RP9Q8TA86 221 aaKnown RBP11.47□□□□□ -0.57
SYVN1-204ENST00000449943 NT5C3BQ969T7 300 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 PRKAG2Q9UGJ0 569 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 AP4B1Q9Y6B7 739 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 NEMP2A6NFY4 417 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 DLX3O60479 287 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 RTN3O95197 1032 aaPredicted RBP11.47□□□□□ -0.57
SYVN1-204ENST00000449943 CRTAMO95727 393 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 SPATA31D3P0C874 917 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 SLC35E2BP0CK96 405 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 DPP6P42658 865 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 DYNC1I2Q13409 638 aaKnown RBP11.47□□□□□ -0.57
SYVN1-204ENST00000449943 SLC12A1Q13621 1099 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 PRAMEF19Q5SWL8 479 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 GK5Q6ZS86 529 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 SPATA31D4Q6ZUB0 917 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 RPS27LQ71UM5 84 aaKnown RBP11.47□□□□□ -0.57
SYVN1-204ENST00000449943 PNPLA1Q8N8W4 532 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 GPR22Q99680 433 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 EPAS1Q99814 870 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 GRIP2Q9C0E4 1043 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 Q9H521 79 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 C6orf203Q9P0P8 240 aaPredicted RBP11.47□□□□□ -0.57
SYVN1-204ENST00000449943 PRPF19Q9UMS4 504 aaKnown RBP11.47□□□□□ -0.57
SYVN1-204ENST00000449943 ACOT9Q9Y305 439 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 IPPQ9Y573 584 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 MYBPHLA2RUH7 354 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 ZNF189O75820 626 aaPredicted RBP11.47□□□□□ -0.57
SYVN1-204ENST00000449943 LRIG2O94898 1065 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 MT-CO1P00395 513 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 DAOAP59103 153 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 NAPEPLDQ6IQ20 393 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 CEP97Q8IW35 865 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 FICDQ9BVA6 458 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 COLEC11Q9BWP8 271 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 CCDC68Q9H2F9 335 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 RHOJQ9H4E5 214 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 CRTAC1Q9NQ79 661 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 UBAP1Q9NZ09 502 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 SLC2A6Q9UGQ3 507 aa11.47□□□□□ -0.57
SYVN1-204ENST00000449943 FBXW11Q9UKB1 542 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms