RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 hCG_2039718K7EN88 272 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ACOT7O00154 380 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 TRDMT1O14717 391 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CPLX1O14810 134 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ADCY6O43306 1168 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 MSI1O43347 362 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 NUAK1O60285 661 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 PIP5K1CO60331 668 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ACSL4O60488 711 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 TLR2O60603 784 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 PQBP1O60828 265 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF623O75123 536 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 FKBP6O75344 327 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 DCTN3O75935 186 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 KRT36O76013 467 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 HEXIM1O94992 359 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZWINTO95229 277 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CTDNEP1O95476 244 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 VNN1O95497 513 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 KRT75O95678 551 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 APBB3O95704 486 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 POP4O95707 220 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 HLA-DRAP01903 254 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 NTRK1P04629 796 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZCCHC18P0CG32 403 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 PCNAP12004 261 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ANPEPP15144 967 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 TYRP1P17643 537 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ATF6P18850 670 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 RRM1P23921 792 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 EPHB2P29323 1055 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 TYK2P29597 1187 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CTNNA1P35221 906 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 MTHFRP42898 656 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 MAGEA11P43364 429 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 PTPN9P43378 593 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC6A11P48066 632 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ME1P48163 572 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 PCYT1AP49585 367 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CLK3P49761 638 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ARHGDIBP52566 201 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 AGFG1P52594 562 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 IST1P53990 364 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 DRG2P55039 364 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 NOP14P78316 857 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CDK16Q00536 496 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 MVKQ03426 396 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 FOLH1Q04609 750 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF33BQ06732 778 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ENPEPQ07075 957 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 DUSP4Q13115 394 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 TARDBPQ13148 414 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 STK3Q13188 491 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ATP1A4Q13733 1029 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 SIM2Q14190 667 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 SELPLGQ14242 412 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 TRIM25Q14258 630 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 EFTUD2Q15029 972 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC39A14Q15043 492 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 PTPAQ15257 358 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CHRNA2Q15822 529 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CPSF6Q16630 551 aaKnown RBP eCLIP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 DGKDQ16760 1214 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 KCNT1Q5JUK3 1230 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CLVS2Q5SYC1 327 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 BEND3Q5T5X7 828 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 MBNL2Q5VZF2 373 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 OLFM4Q6UX06 510 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 IZUMO2Q6UXV1 221 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 DSTYKQ6XUX3 929 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 KYAT3Q6YP21 454 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 USP51Q70EK9 711 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 NIPA1Q7RTP0 329 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ARPINQ7Z6K5 226 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 RALGPS2Q86X27 583 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC41A1Q8IVJ1 513 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCDC28AQ8IWP9 274 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 RTKN2Q8IZC4 609 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ADGRG2Q8IZP9 1017 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CAMKK1Q8N5S9 505 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 C7orf31Q8N865 590 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 NECAB1Q8N987 351 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC4A11Q8NBS3 891 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 RNF169Q8NCN4 708 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC17A8Q8NDX2 589 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 PDZD8Q8NEN9 1154 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 OR7D4Q8NG98 312 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 OR6Y1Q8NGX8 325 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 TBC1D15Q8TC07 691 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 TSPEARQ8WU66 669 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ASB15Q8WXK1 588 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 RAPGEF4Q8WZA2 1011 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 SMG7Q92540 1137 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 RPGRQ92834 1020 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CIDECQ96AQ7 238 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 VPS33AQ96AX1 596 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 PDXPQ96GD0 296 aa3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF486Q96H40 463 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 CNDP2Q96KP4 475 aaKnown RBP3.7□□□□□ -1.82
HMGB3P8-201ENST00000449709 SGCZQ96LD1 299 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms