RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 OXTRP30559 389 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 ACVRL1P37023 503 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 SERPINH1P50454 418 aaKnown RBP14.87□□□□□ -0.03
USP39-206ENST00000448971 POLD3Q15054 466 aaPredicted RBP14.87□□□□□ -0.03
USP39-206ENST00000448971 DLG2Q15700 870 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 CST6Q15828 149 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 KCNT1Q5JUK3 1230 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 NIPA2Q8N8Q9 360 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 FRS2Q8WU20 508 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 ADAMTS14Q8WXS8 1223 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 GPR174Q9BXC1 333 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 MAGEH1Q9H213 219 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 PABPC3Q9H361 631 aaKnown RBP14.87□□□□□ -0.03
USP39-206ENST00000448971 ITM2CQ9NQX7 267 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.87□□□□□ -0.03
USP39-206ENST00000448971 SCML1Q9UN30 329 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 NCKAP1Q9Y2A7 1128 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 GPSM3Q9Y4H4 160 aa14.87□□□□□ -0.03
USP39-206ENST00000448971 A0A1W2PP55 124 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 C1QTNF3-AMACRE9PGA6 284 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 K7ERQ8 282 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 MID1O15344 667 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 CBFA2T3O75081 653 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 ADH1BP00325 375 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 MT-CO1P00395 513 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 TCF4P15884 667 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 GOT1P17174 413 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 MAOBP27338 520 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 ARL4AP40617 200 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 RECQLP46063 649 aaPredicted RBP14.86□□□□□ -0.03
USP39-206ENST00000448971 GEMIN4P57678 1058 aaKnown RBP14.86□□□□□ -0.03
USP39-206ENST00000448971 ARF5P84085 180 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 SFSWAPQ12872 951 aaKnown RBP14.86□□□□□ -0.03
USP39-206ENST00000448971 HADHQ16836 314 aaKnown RBP14.86□□□□□ -0.03
USP39-206ENST00000448971 RFX8Q6ZV50 586 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 CYP4V2Q6ZWL3 525 aaPredicted RBP14.86□□□□□ -0.03
USP39-206ENST00000448971 PSTKQ8IV42 348 aaKnown RBP14.86□□□□□ -0.03
USP39-206ENST00000448971 RGL4Q8IZJ4 473 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 DNASE2BQ8WZ79 361 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 SNX19Q92543 992 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 ARHGEF2Q92974 986 aaKnown RBP14.86□□□□□ -0.03
USP39-206ENST00000448971 OMDQ99983 421 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 BTBD1Q9H0C5 482 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 DONSONQ9NYP3 566 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 WSB2Q9NYS7 404 aaPredicted RBP14.86□□□□□ -0.03
USP39-206ENST00000448971 LCMT1Q9UIC8 334 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 BPTFQ12830 3046 aa14.86□□□□□ -0.03
USP39-206ENST00000448971 PTPRBP23467 1997 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 DOCK4Q8N1I0 1966 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 TMEM110-MUSTN1A8MSY1 372 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 WASH4PA8MWX3 477 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 H3BRJ5 948 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 RNASEH2AO75792 299 aaKnown RBP14.85□□□□□ -0.03
USP39-206ENST00000448971 IGLV3-19P01714 112 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 FTH1P19P0C7X4 201 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 IL1R2P27930 398 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 SLC8A1P32418 973 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 ZNF135P52742 658 aaPredicted RBP14.85□□□□□ -0.03
USP39-206ENST00000448971 KRT81Q14533 505 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 PARP15Q460N3 678 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 SYCP2LQ5T4T6 812 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 CCNI2Q6ZMN8 369 aaPredicted RBP14.85□□□□□ -0.03
USP39-206ENST00000448971 SLCO6A1Q86UG4 719 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 PDCD7Q8N8D1 485 aaKnown RBP14.85□□□□□ -0.03
USP39-206ENST00000448971 PNPLA1Q8N8W4 532 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 FOXJ1Q92949 421 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 ACE2Q9BYF1 805 aaPredicted RBP14.85□□□□□ -0.03
USP39-206ENST00000448971 TNKS2Q9H2K2 1166 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 OSGEPQ9NPF4 335 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 FBXL12Q9NXK8 326 aa14.85□□□□□ -0.03
USP39-206ENST00000448971 FCF1Q9Y324 198 aaKnown RBP14.85□□□□□ -0.03
USP39-206ENST00000448971 NUMA1Q14980 2115 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 RASA4BC9J798 803 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 ALOX15BO15296 676 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 RASA4O43374 803 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 SMAD6O43541 496 aaKnown RBP14.84□□□□□ -0.03
USP39-206ENST00000448971 ZMPSTE24O75844 475 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 PROSCO94903 275 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 SEMA4FO95754 770 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 RARAP10276 462 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 C5AR1P21730 350 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 ACSL1P33121 698 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 CYLC1P35663 651 aaPredicted RBP14.84□□□□□ -0.03
USP39-206ENST00000448971 DNA2P51530 1060 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 YBEYP58557 167 aaPredicted RBP14.84□□□□□ -0.03
USP39-206ENST00000448971 SLC25A11Q02978 314 aaKnown RBP14.84□□□□□ -0.03
USP39-206ENST00000448971 DPYSL2Q16555 572 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 POM121L1PQ3SYA9 428 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 BOLA3Q53S33 107 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 WDR45BQ5MNZ6 344 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 ZFYVE27Q5T4F4 411 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 FAM46CQ5VWP2 391 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 LEKR1Q6ZMV7 388 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 USP30Q70CQ3 517 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 GLRX5Q86SX6 157 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 NAXDQ8IW45 347 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 RHOT2Q8IXI1 618 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 PCDH20Q8N6Y1 951 aaKnown RBP14.84□□□□□ -0.03
USP39-206ENST00000448971 PIP4K2CQ8TBX8 421 aa14.84□□□□□ -0.03
USP39-206ENST00000448971 GRIN3AQ8TCU5 1115 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms