RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 OR12D3Q9UGF7 316 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 PADI4Q9UM07 663 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 ASTN1O14525 1302 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 SLC35G4P0C7Q5 338 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TACR2P21452 398 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 AMPD1P23109 780 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TTI2Q6NXR4 508 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 MRPL10Q7Z7H8 261 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 LONP2Q86WA8 852 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 FMR1NBQ8N0W7 255 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 POLR1EQ9GZS1 481 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLPBQ9H078 707 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 ALG2Q9H553 416 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 CACNG4Q9UBN1 327 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 DOCK8Q8NF50 2099 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 TARSL2A2RTX5 802 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 KRT38O76015 456 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 POP4O95707 220 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 JCHAINP01591 159 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 NEK2P51955 445 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 PKP1Q13835 747 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 FNBP1LQ5T0N5 605 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 NT5DC3Q86UY8 548 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 HNRNPABQ99729 332 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 CLSTN3Q9BQT9 956 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 ABCA3Q99758 1704 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 DFNA5O60443 496 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 COX7A2P14406 83 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 MAOBP27338 520 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 GRIN1Q05586 938 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 C14orf28Q4W4Y0 310 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 MAGEC3Q8TD91 643 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 FAR1Q8WVX9 515 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 CELF6Q96J87 481 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 NAPGQ99747 312 aaPredicted RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 ST6GALNAC4Q9H4F1 302 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 RPRD1BQ9NQG5 326 aaKnown RBP5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 JRKLQ9Y4A0 524 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 NUP98P52948 1817 aa5.72□□□□□ -1.49
CDC42BPA-209ENST00000448940 SMIM23A6NLE4 172 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 GPR32O75388 356 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 IDSP22304 550 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 CASP2P42575 452 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 PDK2Q15119 407 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 RBBP5Q15291 538 aaKnown RBP5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 TRIP4Q15650 581 aaPredicted RBP5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF423Q2M1K9 1284 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 SH2D4BQ5SQS7 431 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 ADGRF1Q5T601 910 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 CAPN12Q6ZSI9 719 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 SIDT2Q8NBJ9 832 aaKnown RBP5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 CALML6Q8TD86 181 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 TMEM40Q8WWA1 233 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 NTPCRQ9BSD7 190 aaKnown RBP5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 RBSNQ9H1K0 784 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 MTCH2Q9Y6C9 303 aa5.71□□□□□ -1.49
CDC42BPA-209ENST00000448940 UNC13CQ8NB66 2214 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CCDC151A5D8V7 595 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 C2CD4DB7Z1M9 353 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 SPECC1L-ADORA2AF8WAN1 911 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 BMP10O95393 424 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 INHBAP08476 426 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 DLDP09622 509 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CHRM3P20309 590 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 HPDP32754 393 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 FXR1P51114 621 aaKnown RBP eCLIP5.71□□□□□ -1.55e-6■■■□□ 17.2
CDC42BPA-209ENST00000448940 AFF3P51826 1226 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 EIF3EP60228 445 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 SGCBQ16585 318 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 MTERF4Q7Z6M4 381 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 LINC00523Q86TU6 105 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 SNX31Q8N9S9 440 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 DENND1AQ8TEH3 1009 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 OVCA2Q8WZ82 227 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 C17orf62Q9BQA9 187 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 WNT16Q9UBV4 365 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 AAR2Q9Y312 384 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 HYOU1Q9Y4L1 999 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 ABCA4P78363 2273 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 OR10H2O60403 315 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 ECEL1O95672 775 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CHEK2O96017 543 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 ADH1BP00325 375 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 RETP07949 1114 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 PFKLP17858 780 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 LRPAP1P30533 357 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 NEK3P51956 506 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 BLVRAP53004 296 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 ECT2LQ008S8 904 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 SLC30A9Q6PML9 568 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 APLFQ8IW19 511 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CFAP52Q8N1V2 620 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 EMC1Q8N766 993 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 CPSF2Q9P2I0 782 aaKnown RBP5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 MAN2B2Q9Y2E5 1009 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 YKT6O15498 198 aa5.71□□□□□ -1.5
CDC42BPA-209ENST00000448940 TCP1P17987 556 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms