RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 DOCK9Q9BZ29 2069 aa12.77□□□□□ -0.37
SSR4-205ENST00000447375 TMEM191CA6NGB0 347 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 DRGXA6NNA5 263 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 YKT6O15498 198 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 MFAP3LO75121 409 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 LUC7L3O95232 432 aaKnown RBP12.76□□□□□ -0.37
SSR4-205ENST00000447375 MT-CO3P00414 261 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 MPOP05164 745 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 CD70P32970 193 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 EIF4A3P38919 411 aaKnown RBP12.76□□□□□ -0.37
SSR4-205ENST00000447375 E2F1Q01094 437 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 CDO1Q16878 200 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 ASTE1Q2TB18 679 aaPredicted RBP12.76□□□□□ -0.37
SSR4-205ENST00000447375 FSCBQ5H9T9 825 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 SERPINA13PQ6UXR4 307 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 CCDC117Q8IWD4 279 aaPredicted RBP12.76□□□□□ -0.37
SSR4-205ENST00000447375 AHI1Q8N157 1196 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
SSR4-205ENST00000447375 CARNMT1Q8N4J0 409 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 FAM172AQ8WUF8 416 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 TRIM11Q96F44 468 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 OSBPL2Q9H1P3 480 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 TMPRSS4Q9NRS4 437 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 ABHD10Q9NUJ1 306 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 ZNHIT6Q9NWK9 470 aaKnown RBP12.76□□□□□ -0.37
SSR4-205ENST00000447375 CNOT8Q9UFF9 292 aaKnown RBP12.76□□□□□ -0.37
SSR4-205ENST00000447375 VANGL2Q9ULK5 521 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 NENFQ9UMX5 172 aa12.76□□□□□ -0.37
SSR4-205ENST00000447375 IGLV3-10A0A075B6K4 115 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 A0A1B0GVM2 712 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 SSU72P8A0A1W2PR75 194 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 TCAF2A6NFQ2 919 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 K7ENP7 123 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 ATMINO43313 823 aaPredicted RBP12.75□□□□□ -0.37
SSR4-205ENST00000447375 GP1BBP13224 206 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 IRAK1P51617 712 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 ZNF75DP51815 510 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 ADKP55263 362 aaKnown RBP12.75□□□□□ -0.37
SSR4-205ENST00000447375 ERVPABLB-1P60509 514 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 GABREP78334 506 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 OGDHQ02218 1023 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 MAPK8IP2Q13387 824 aaPredicted RBP12.75□□□□□ -0.37
SSR4-205ENST00000447375 SLC12A1Q13621 1099 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 CDH18Q13634 790 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 TSR1Q2NL82 804 aaKnown RBP12.75□□□□□ -0.37
SSR4-205ENST00000447375 ARL13BQ3SXY8 428 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 MBLAC2Q68D91 279 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 ALKBH5Q6P6C2 394 aaKnown RBP12.75□□□□□ -0.37
SSR4-205ENST00000447375 INO80CQ6PI98 192 aaPredicted RBP12.75□□□□□ -0.37
SSR4-205ENST00000447375 ATG14Q6ZNE5 492 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 CHST9Q7L1S5 443 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 CNGA4Q8IV77 575 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 SORCS1Q8WY21 1168 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 NTAN1Q96AB6 310 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 TTC17Q96AE7 1141 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 MRFAP1L1Q96HT8 127 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 SLC6A18Q96N87 628 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 RPRD1AQ96P16 312 aaPredicted RBP12.75□□□□□ -0.37
SSR4-205ENST00000447375 CIPCQ9C0C6 399 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 SGK2Q9HBY8 427 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 MRPL47Q9HD33 250 aaKnown RBP12.75□□□□□ -0.37
SSR4-205ENST00000447375 INTS6Q9UL03 887 aaKnown RBP12.75□□□□□ -0.37
SSR4-205ENST00000447375 SNX10Q9Y5X0 201 aa12.75□□□□□ -0.37
SSR4-205ENST00000447375 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 AKR1B15C9JRZ8 316 aaPredicted RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 CCP110O43303 1012 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 CLDN11O75508 207 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 DXOO77932 396 aaKnown RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 WNT1P04628 370 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 IGHV4-34P06331 123 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 ATP5BP06576 529 aaKnown RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 DLDP09622 509 aaKnown RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 POLR2EP19388 210 aaKnown RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 ACP1P24666 158 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 EPHA8P29322 1005 aaPredicted RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 GGCXP38435 758 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 ARRB1P49407 418 aaPredicted RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 PLK1P53350 603 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 CDH4P55283 916 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 OXCT1P55809 520 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 NRG1Q02297 640 aaPredicted RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 BNIP3Q12983 259 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 ZNF177Q13360 481 aaPredicted RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 CAMK2GQ13555 558 aaPredicted RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 SLC18A3Q16572 532 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 CCDC122Q5T0U0 273 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 KIAA0895LQ68EN5 471 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 CXorf57Q6NSI4 855 aaKnown RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 LRRC31Q6UY01 552 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 TMC6Q7Z403 805 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 CIR1Q86X95 450 aaPredicted RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 EXD3Q8N9H8 876 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 FNIP1Q8TF40 1166 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 ZNF653Q96CK0 615 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 CHP1Q99653 195 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 TRIM7Q9C029 511 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 GDF3Q9NR23 364 aa12.74□□□□□ -0.37
SSR4-205ENST00000447375 PPARGC1AQ9UBK2 798 aaKnown RBP12.74□□□□□ -0.37
SSR4-205ENST00000447375 OR12D3Q9UGF7 316 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms