RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 LRRC8EQ6NSJ5 796 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 CLEC20AQ6ZU45 233 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 OSTM1Q86WC4 334 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 CNTN4Q8IWV2 1026 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 KDM1BQ8NB78 822 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 KCTD4Q8WVF5 259 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 USP13Q92995 863 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 PGAP3Q96FM1 320 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 MPP4Q96JB8 637 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 SCYL1Q96KG9 808 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 APBA2Q99767 749 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 RNF19AQ9NV58 838 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 UTP6Q9NYH9 597 aaKnown RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 PCDHGB4Q9UN71 923 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 PCDHGB5Q9Y5G0 923 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 COPG1Q9Y678 874 aaKnown RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 ZNF236Q9UL36 1845 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 NRCAMQ92823 1304 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 H0YJX3 145 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 CLDN5O00501 218 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 PSMD3O43242 534 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 NPHS1O60500 1241 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 JUNP05412 331 aaKnown RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 FAM58BPP0C7Q3 252 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 KCNE1P15382 129 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 TPH1P17752 444 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 AKAP5P24588 427 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 ZNF135P52742 658 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 UGP2Q16851 508 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 SH2D4BQ5SQS7 431 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 NXNQ6DKJ4 435 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 BORAQ6PGQ7 559 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 KLHDC10Q6PID8 442 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 LINC00523Q86TU6 105 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 TOP6BLQ8N6T0 577 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 ZSCAN18Q8TBC5 510 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-204ENST00000447182 ADAM32Q8TC27 787 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 DDI1Q8WTU0 396 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 CNBD2Q96M20 576 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 KLHL32Q96NJ5 620 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 APOL2Q9BQE5 337 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 SLC2A11Q9BYW1 496 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 ACSS2Q9NR19 701 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 DMTF1Q9Y222 760 aa19.36■□□□□ 0.69
SDCBP-204ENST00000447182 GOLGA8TH3BQL2 631 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 TRIM38O00635 465 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 AHSGP02765 367 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 GABRB3P28472 473 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 MSX2P35548 267 aaPredicted RBP19.35■□□□□ 0.69
SDCBP-204ENST00000447182 GLRBP48167 497 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 IREB2P48200 963 aaKnown RBP19.35■□□□□ 0.69
SDCBP-204ENST00000447182 CCNA1P78396 465 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 TMEM259Q4ZIN3 620 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 LRRC23Q53EV4 343 aaPredicted RBP19.35■□□□□ 0.69
SDCBP-204ENST00000447182 GPR78Q96P69 363 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 OCEL1Q9H607 264 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 MRGBPQ9NV56 204 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 MAGED2Q9UNF1 606 aaPredicted RBP19.35■□□□□ 0.69
SDCBP-204ENST00000447182 ACOT9Q9Y305 439 aa19.35■□□□□ 0.69
SDCBP-204ENST00000447182 TRPC5OSA6NMA1 111 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 NRP1O14786 923 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 CACNG3O60359 315 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 VAPBO95292 243 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 HOXD8P13378 290 aaPredicted RBP19.34■□□□□ 0.69
SDCBP-204ENST00000447182 PTPN1P18031 435 aaKnown RBP19.34■□□□□ 0.69
SDCBP-204ENST00000447182 TKTL1P51854 596 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 PRPSAP1Q14558 356 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 ZNF792Q3KQV3 632 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 EGFL6Q8IUX8 553 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 ASB9Q96DX5 294 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 MRPL40Q9NQ50 206 aaKnown RBP19.34■□□□□ 0.69
SDCBP-204ENST00000447182 XPR1Q9UBH6 696 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 GINS2Q9Y248 185 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 SHROOM3Q8TF72 1996 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 STX16-NPEPL1H3BU86 382 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 LILRA4P59901 499 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 RAB10P61026 200 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 CDKL1Q00532 357 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 ADRM1Q16186 407 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 GPC2Q8N158 579 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 PELI3Q8N2H9 469 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 RNF148Q8N7C7 305 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 CEP70Q8NHQ1 597 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 TOP1MTQ969P6 601 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 CDHR5Q9HBB8 845 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 EPS15L1Q9UBC2 864 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 PHF24Q9UPV7 400 aa19.34■□□□□ 0.69
SDCBP-204ENST00000447182 NUP205Q92621 2012 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 FAM163BP0C2L3 166 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 SAT1P21673 171 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 AXLP30530 894 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 ADCYAP1R1P41586 468 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 DAOAP59103 153 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 ZNF33AQ06730 810 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 SOX4Q06945 474 aaPredicted RBP19.33■□□□□ 0.69
SDCBP-204ENST00000447182 TMEM62Q0P6H9 643 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 PTK2BQ14289 1009 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 ARL13BQ3SXY8 428 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 PCID2Q5JVF3 399 aa19.33■□□□□ 0.69
SDCBP-204ENST00000447182 C6orf52Q5T4I8 152 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms