RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TSPAN3O60637 253 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 GLRA3O75311 464 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 ABLIM3O94929 683 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 URODP06132 367 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 KITP10721 976 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 RAG1P15918 1043 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 HMGA1P17096 107 aaKnown RBP9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 CORO1AP31146 461 aaKnown RBP9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 ADRA1AP35348 466 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 RPS24P62847 133 aaKnown RBP9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 DSG1Q02413 1049 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 TWF1Q12792 350 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 CTBP1Q13363 440 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 SERINC3Q13530 473 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 LBRQ14739 615 aaKnown RBP9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 VEPH1Q14D04 833 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 DLG2Q15700 870 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 CNGA3Q16281 694 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 PARP15Q460N3 678 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 PDPK2PQ6A1A2 396 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 RANBP10Q6VN20 620 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 ZCCHC23Q6ZST2 131 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 RAPH1Q70E73 1250 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 RNF168Q8IYW5 571 aaPredicted RBP9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 CNPY4Q8N129 248 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 SLC39A11Q8N1S5 342 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 ACMSDQ8TDX5 336 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 IMP4Q96G21 291 aaKnown RBP9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 YME1L1Q96TA2 773 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 TRIM55Q9BYV6 548 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 RNF38Q9H0F5 515 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 TRPC7Q9HCX4 862 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 ZNF358Q9NW07 568 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 SLC39A10Q9ULF5 831 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 YIPF1Q9Y548 306 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 ACTL7AQ9Y615 435 aa9.66□□□□□ -0.86
COL6A4P1-201ENST00000446690 TRIM43BA6NCK2 446 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 CLGNO14967 610 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 BPGMP07738 259 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 PGGT1BP53609 377 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 LIMK2P53671 638 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 IL10RBQ08334 325 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 BST1Q10588 318 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 FASTKD1Q53R41 847 aaKnown RBP9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 ATG16L1Q676U5 607 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 ZNF449Q6P9G9 518 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 POTEHQ6S545 545 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 KYAT3Q6YP21 454 aaKnown RBP9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 DENND6AQ8IWF6 608 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 TRIM42Q8IWZ5 723 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 PGBD5Q8N414 524 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 GBP7Q8N8V2 638 aaPredicted RBP9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 ACVR1CQ8NER5 493 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 C10orf82Q8WW14 230 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 TRIM43Q96BQ3 446 aaPredicted RBP9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 ZNF689Q96CS4 500 aaPredicted RBP9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 ERP27Q96DN0 273 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 CYP2S1Q96SQ9 504 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 MYLK2Q9H1R3 596 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 ECT2Q9H8V3 914 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 MKS1Q9NXB0 559 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 SPG21Q9NZD8 308 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 ZNF212Q9UDV6 495 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 SLC12A4Q9UP95 1085 aa9.65□□□□□ -0.86
COL6A4P1-201ENST00000446690 A0A096LPK6 155 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 C2orf71A6NGG8 1288 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 TIMP1P01033 207 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 KLKB1P03952 638 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 RFC2P35250 354 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 MAPKAPK2P49137 400 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 SERPINB8P50452 374 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 WDR5P61964 334 aaKnown RBP9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 THOC5Q13769 683 aaKnown RBP9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZNF235Q14590 738 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 ACBD5Q5T8D3 534 aaPredicted RBP9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 C1orf53Q5VUE5 145 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 TPGS2Q68CL5 300 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 KDELC1Q6UW63 502 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 C16orf59Q7L2K0 433 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 NLRP9Q7RTR0 991 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 DNAJB7Q7Z6W7 309 aaPredicted RBP9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 KLHDC8BQ8IXV7 354 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 OR7D4Q8NG98 312 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 VPS39Q96JC1 886 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZNF333Q96JL9 665 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 SEMA3CQ99985 751 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 C11orf49Q9H6J7 331 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 TMEM216Q9P0N5 145 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 UXTQ9UBK9 157 aaPredicted RBP9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 MARCOQ9UEW3 520 aaPredicted RBP9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 CHKBQ9Y259 395 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 TCAF1Q9Y4C2 921 aa9.65□□□□□ -0.87
COL6A4P1-201ENST00000446690 ZBBXA8MT70 800 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 TIMM44O43615 452 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 DCTN3O75935 186 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 STC2O76061 302 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 AHSGP02765 367 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 MMP2P08253 660 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 LAG3P18627 525 aa9.64□□□□□ -0.87
COL6A4P1-201ENST00000446690 PAMP19021 973 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms