RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 YJEFN3A6XGL0 299 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 E7ENQ6 273 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 FOSL1P15407 271 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ABCB4P21439 1286 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ACP1P24666 158 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 EPHA8P29322 1005 aaPredicted RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 NXPH1P58417 271 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 C19orf57Q0VDD7 668 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 TUBB2AQ13885 445 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 SETMARQ53H47 684 aaPredicted RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 PITRM1Q5JRX3 1037 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 C9orf64Q5T6V5 341 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 FBXL19Q6PCT2 694 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 XKR5Q6UX68 686 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 LMNTD2Q8IXW0 634 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 BHMTQ93088 406 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 MYO19Q96H55 970 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CNDP2Q96KP4 475 aaKnown RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 FCRL2Q96LA5 508 aaPredicted RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 MRGPRX3Q96LB0 322 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CCDC114Q96M63 670 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 PANX2Q96RD6 677 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 NAPGQ99747 312 aaPredicted RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 TUBB2BQ9BVA1 445 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 PRORYQ9H606 182 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 RMI1Q9H9A7 625 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 PKD1L2Q7Z442 2459 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 C1QTNF3-AMACRE9PGA6 284 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 TLR4O00206 839 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 GP1BAP07359 652 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CD19P15391 556 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CKMT2P17540 419 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CSKP41240 450 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ACADVLP49748 655 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ATP1A2P50993 1020 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 DUSP3P51452 185 aaPredicted RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CDH18Q13634 790 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 VWA3BQ502W6 1294 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 SFMBT2Q5VUG0 894 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 C6orf89Q6UWU4 347 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 BZW1Q7L1Q6 419 aaKnown RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 SPATS2Q86XZ4 545 aaKnown RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 SH2D3CQ8N5H7 860 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 ZNF473Q8WTR7 871 aaKnown RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 C17orf50Q8WW18 174 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 SLC35C1Q96A29 364 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 P2RY11Q96G91 374 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CD93Q9NPY3 652 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CLEC4EQ9ULY5 219 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 TMA7Q9Y2S6 64 aaKnown RBP6.17□□□□□ -1.42
PTPRR-204ENST00000440835 RAXQ9Y2V3 346 aa6.17□□□□□ -1.42
PTPRR-204ENST00000440835 CACNA1GO43497 2377 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 A0A1B0GVM2 712 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 TCAF2A6NFQ2 919 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 PRAMEF26H0Y7S4 382 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 PLRG1O43660 514 aaKnown RBP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 ATP9BO43861 1147 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 SIN3BO75182 1162 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 TPPPO94811 219 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 IGLV3-25P01717 112 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 SLC8A1P32418 973 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 EIF2S3P41091 472 aaKnown RBP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 FMO5P49326 533 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 SEC24CP53992 1094 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 MARSP56192 900 aaKnown RBP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 ZNF211Q13398 564 aaPredicted RBP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 C5orf22Q49AR2 442 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 ZNF394Q53GI3 561 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 CCDC70Q6NSX1 233 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 KANSL1Q7Z3B3 1105 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 FAM124AQ86V42 546 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 LCA5Q86VQ0 697 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 WDR48Q8TAF3 677 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 GANCQ8TET4 914 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 CYB5D2Q8WUJ1 264 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 OR8D1Q8WZ84 308 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 STAMBPL1Q96FJ0 436 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 TBATAQ96M53 351 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 ZNF578Q96N58 590 aaPredicted RBP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 SLC4A5Q9BY07 1137 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 EDEM3Q9BZQ6 932 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 TJP2Q9UDY2 1190 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 CYTH4Q9UIA0 394 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 SLC25A13Q9UJS0 675 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 MYO6Q9UM54 1294 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 FARP1Q9Y4F1 1045 aaPredicted RBP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 PCDHB4Q9Y5E5 795 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 F5H5T6 163 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 SMNDC1O75940 238 aaKnown RBP eCLIP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 DXOO77932 396 aaKnown RBP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 ALPPL2P10696 532 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 JUPP14923 745 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 CD70P32970 193 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 LSP1P33241 339 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 PMS1P54277 932 aaKnown RBP6.16□□□□□ -1.42
PTPRR-204ENST00000440835 ADPRHP54922 357 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 RHDQ02161 417 aa6.16□□□□□ -1.42
PTPRR-204ENST00000440835 PDAP1Q13442 181 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms