RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ORC3Q9UBD5 711 aaPredicted RBP3.77□□□□□ -1.81
VPS41-207ENST00000439468 PEMTQ9UBM1 199 aa3.77□□□□□ -1.81
VPS41-207ENST00000439468 CDH22Q9UJ99 828 aa3.77□□□□□ -1.81
VPS41-207ENST00000439468 LAMP3Q9UQV4 416 aa3.77□□□□□ -1.81
VPS41-207ENST00000439468 OR6C68A6NDL8 312 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 DDTLA6NHG4 134 aaPredicted RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 B4DGG1 531 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 SNAP23O00161 211 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 TGFB1I1O43294 461 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 SLC25A17O43808 307 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 USO1O60763 962 aaKnown RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 GUCY1B2O75343 617 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 DDAH2O95865 285 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 SYF2O95926 243 aaKnown RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 CRYABP02511 175 aaKnown RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 CHRM4P08173 479 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 UBL4AP11441 157 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 TFEBP19484 476 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 EPHA8P29322 1005 aaPredicted RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 CHRNA5P30532 468 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 MAPK4P31152 587 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 EFNA5P52803 228 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 EFNB1P98172 346 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 PMPCAQ10713 525 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 PTP4A2Q12974 167 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 MTX1Q13505 466 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 TBCEQ15813 527 aaPredicted RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 PLK5Q496M5 336 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 C5orf22Q49AR2 442 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 SYTL3Q4VX76 610 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 MIDNQ504T8 468 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 SLC45A4Q5BKX6 768 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 ENTPD8Q5MY95 495 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 WDR78Q5VTH9 848 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 TTLL5Q6EMB2 1281 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 HMBOX1Q6NT76 420 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 AADACL2Q6P093 401 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 C17orf99Q6UX52 265 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 FAM57BQ71RH2 274 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 CYB5R4Q7L1T6 521 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 ARMC8Q8IUR7 673 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 DNAAF1Q8NEP3 725 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 ZNF419Q96HQ0 510 aaPredicted RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 ZFYVE19Q96K21 471 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 NLRP4Q96MN2 994 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 BARD1Q99728 777 aaKnown RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 CHCHD6Q9BRQ6 235 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 FAM234AQ9H0X4 552 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 VEZTQ9HBM0 779 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 BLOC1S4Q9NUP1 217 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 BEX4Q9NWD9 120 aaPredicted RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 IL1RAPL1Q9NZN1 696 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 HSPB7Q9UBY9 170 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 DHDHQ9UQ10 334 aa3.76□□□□□ -1.81
VPS41-207ENST00000439468 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.76□□□□□ -1.81
VPS41-207ENST00000439468 RUSC2Q8N2Y8 1516 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 FAM90A10PA6NDY2 464 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 F8W810 466 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 RHODO00212 210 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 TSPAN4O14817 238 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 LDLRAD4O15165 306 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 CNOT3O75175 753 aaKnown RBP3.75□□□□□ -1.81
VPS41-207ENST00000439468 TACC1O75410 805 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 HLA-DQA2P01906 255 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 TKTP29401 623 aaKnown RBP3.75□□□□□ -1.81
VPS41-207ENST00000439468 ICAM3P32942 547 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 MAN1A1P33908 653 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 SKIV2L2P42285 1042 aaKnown RBP3.75□□□□□ -1.81
VPS41-207ENST00000439468 FOXG1P55316 489 aaPredicted RBP3.75□□□□□ -1.81
VPS41-207ENST00000439468 TMPRSS3P57727 454 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 DCTN2Q13561 401 aaKnown RBP3.75□□□□□ -1.81
VPS41-207ENST00000439468 PKP1Q13835 747 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 RPE65Q16518 533 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 ME3Q16798 604 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 TMEM268Q5VZI3 342 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 ATF7IPQ6VMQ6 1270 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 GPSM1Q86YR5 675 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 CPXM2Q8N436 756 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 TNIP2Q8NFZ5 429 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 ZCCHC10Q8TBK6 192 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 FAR1Q8WVX9 515 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 PERPQ96FX8 193 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 VCPIP1Q96JH7 1222 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 KLHL15Q96M94 604 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 IFT27Q9BW83 186 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 ERVK-5Q9HDB9 667 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 ATP8A2Q9NTI2 1148 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 SARDHQ9UL12 918 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 COG5Q9UP83 839 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 PIAS3Q9Y6X2 628 aa3.75□□□□□ -1.81
VPS41-207ENST00000439468 ADGRF5Q8IZF2 1346 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 TRBV5-7A0A0A0MS05 114 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 TEX13CA0A0J9YWL9 993 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 GOLGA6L10A0A0M3HER8 536 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 DPPA5A6NC42 116 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 GAGE10A6NGK3 116 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 CD8B2A6NJW9 211 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 A6NNC1 897 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 FOXO6A8MYZ6 492 aa3.74□□□□□ -1.81
VPS41-207ENST00000439468 TNFSF14O43557 240 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms