RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 AP1G1O43747 822 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 CABYRO75952 493 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 FBXO21O94952 628 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 INHAP05111 366 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 CST5P28325 142 aaPredicted RBP16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 GSTT1P30711 240 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 RPL14P50914 215 aaKnown RBP16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 NSUN2Q08J23 767 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 LSM12Q3MHD2 195 aaKnown RBP16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 MMEL1Q495T6 779 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 UBXN11Q5T124 520 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 LCA5Q86VQ0 697 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 KYQ8NBH2 561 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 RP9Q8TA86 221 aaKnown RBP16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 PIP4K2CQ8TBX8 421 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 ADAM32Q8TC27 787 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 VAT1Q99536 393 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 SERPINI1Q99574 410 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 ULBP1Q9BZM6 244 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 TASP1Q9H6P5 420 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 WDR55Q9H6Y2 383 aaPredicted RBP16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 NSMCE4AQ9NXX6 385 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 SLC39A10Q9ULF5 831 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 PIN4Q9Y237 131 aaKnown RBP16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 SLC4A7Q9Y6M7 1214 aa16.65■□□□□ 0.26
CLCNKA-203ENST00000439316 PABPC4LP0CB38 370 aaKnown RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 NMBRP28336 390 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 ADSLP30566 484 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 GRIA2P42262 883 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 ALDH1A3P47895 512 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 GRIA4P48058 902 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 CRYBB1P53674 252 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 DAOAP59103 153 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 HERC3Q15034 1050 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 PDK3Q15120 406 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 PPM1LQ5SGD2 360 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 KIAA0319Q5VV43 1072 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 FBXL19Q6PCT2 694 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 UGT2A3Q6UWM9 527 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 SETD3Q86TU7 594 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 ZC3HC1Q86WB0 502 aaKnown RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 PCSK9Q8NBP7 692 aaKnown RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 ICA1LQ8NDH6 482 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 DPF3Q92784 378 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 PGAP3Q96FM1 320 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 APOL2Q9BQE5 337 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 RHOJQ9H4E5 214 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 SAGE1Q9NXZ1 904 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 INPP5FQ9Y2H2 1132 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 DTNAQ9Y4J8 743 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 FNDC1Q4ZHG4 1894 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 YJEFN3A6XGL0 299 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 NEMP1O14524 444 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 GABRDO14764 452 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 AIM2O14862 343 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 PIGNO95427 931 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 FAM200BP0CF97 657 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 LRPAP1P30533 357 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 PPARGP37231 505 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 CCR10P46092 362 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 MAP3K7CLP57077 242 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 PRKAA1Q13131 559 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 ARHGEF6Q15052 776 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 GRAMD1BQ3KR37 738 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 ARL13AQ5H913 290 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 RASIP1Q5U651 963 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 BNC2Q6ZN30 1099 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 RNF180Q86T96 592 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 KLHDC8BQ8IXV7 354 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 DSELQ8IZU8 1212 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 STYXQ8WUJ0 223 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 TEKT5Q96M29 485 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 MED10Q9BTT4 135 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 KIFC1Q9BW19 673 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 DMAP1Q9NPF5 467 aaPredicted RBP16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 VTI1BQ9UEU0 232 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 TLK1Q9UKI8 766 aa16.64■□□□□ 0.25
CLCNKA-203ENST00000439316 AP3B1O00203 1094 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 FAM163BP0C2L3 166 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 TPH1P17752 444 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 DNAJB1P25685 340 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 DNAJB2P25686 324 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 EPHA3P29320 983 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 CHN2P52757 468 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 THOP1P52888 689 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 FOLH1Q04609 750 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 CDH17Q12864 832 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 ZNF423Q2M1K9 1284 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 PIGGQ5H8A4 983 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 WSCD1Q658N2 575 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 NAPEPLDQ6IQ20 393 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 ZSCAN18Q8TBC5 510 aaPredicted RBP16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 TSNARE1Q96NA8 513 aa16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 MAGED2Q9UNF1 606 aaPredicted RBP16.63■□□□□ 0.25
CLCNKA-203ENST00000439316 CAPN8A6NHC0 703 aa16.62■□□□□ 0.25
CLCNKA-203ENST00000439316 TARM1B6A8C7 271 aa16.62■□□□□ 0.25
CLCNKA-203ENST00000439316 SLCO1B7G3V0H7 640 aa16.62■□□□□ 0.25
CLCNKA-203ENST00000439316 SLC35E2BP0CK96 405 aa16.62■□□□□ 0.25
CLCNKA-203ENST00000439316 GRK4P32298 578 aa16.62■□□□□ 0.25
CLCNKA-203ENST00000439316 ZNF135P52742 658 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms