RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 FSCN3Q9NQT6 498 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 SEMA4GQ9NTN9 838 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 KLHL11Q9NVR0 708 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 TMEM248Q9NWD8 314 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 FBXL12Q9NXK8 326 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 CWC15Q9P013 229 aaKnown RBP5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 SARDHQ9UL12 918 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 HYOU1Q9Y4L1 999 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 PCDHA13Q9Y5I0 950 aa5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 EPN1Q9Y6I3 576 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P24-201ENST00000433260 TNRC6BQ9UPQ9 1833 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 PLXND1Q9Y4D7 1925 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 SHROOM3Q8TF72 1996 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3DA0A087WVF3 549 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3IA0A087WXS9 549 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3EA0A087X179 549 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3KA0A087X1G2 549 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 BCLAF3A2AJT9 711 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3FA6NER0 549 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 METTL12A8MUP2 240 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 MEI4A8MW99 385 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3LB9A6J9 549 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 RASA4BC9J798 803 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 J3KR12 359 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 KPNA3O00505 521 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 KRIT1O00522 736 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 KHNYNO15037 678 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 MCF2LO15068 1137 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CAPN5O15484 640 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 FGF10O15520 208 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 RASA4O43374 803 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZNF821O75541 412 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZMPSTE24O75844 475 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 PROSCO94903 275 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 FSBPO95073 299 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 EPN2O95208 641 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CD160O95971 181 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CTSLP07711 333 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CD48P09326 243 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3HP0C7X1 549 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TGM1P22735 817 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CHRNA3P32297 505 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 PCK1P35558 622 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ETFBP38117 255 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 MPLP40238 635 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ARL4AP40617 200 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 RECQLP46063 649 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 SCTRP47872 440 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 PAPOLAP51003 745 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 NAP1L1P55209 391 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CDH6P55285 790 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 IRX4P78413 519 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 SEMA3BQ13214 749 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ELOAQ14241 798 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ACAP1Q15027 740 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 SPA17Q15506 151 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CST6Q15828 149 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 HADHQ16836 314 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CARD16Q5EG05 197 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 LYSMD4Q5XG99 296 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3GQ6DHY5 549 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3CQ6IPX1 549 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 RAD9BQ6WBX8 426 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZNF783Q6ZMS7 281 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 DPY19L3Q6ZPD9 716 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ARHGAP36Q6ZRI8 547 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CYP4V2Q6ZWL3 525 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 C11orf74Q86VG3 221 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TMTC1Q8IUR5 882 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TBC1D3Q8IZP1 549 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 AADATQ8N5Z0 425 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 RTL3Q8N8U3 475 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 C12orf50Q8NA57 414 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 DCAF4L2Q8NA75 395 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 KDM1BQ8NB78 822 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 OR2A12Q8NGT7 310 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 OR6K2Q8NGY2 324 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 OR14C36Q8NHC7 312 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 PIP4K2CQ8TBX8 421 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 FNIP1Q8TF40 1166 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 OR8D1Q8WZ84 308 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 SNX19Q92543 992 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 HPS1Q92902 700 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ITPKCQ96DU7 683 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 HMCESQ96FZ2 354 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZNF419Q96HQ0 510 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 LOXL4Q96JB6 756 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 HSPA12BQ96MM6 686 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 BAG1Q99933 345 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 NCAPGQ9BPX3 1015 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 CALN1Q9BXU9 219 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 TM6SF2Q9BZW4 377 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 BTBD1Q9H0C5 482 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 PABPC3Q9H361 631 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 NOL6Q9H6R4 1146 aaKnown RBP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 ZDHHC6Q9H6R6 413 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 RXFP3Q9NSD7 469 aa5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.88□□□□□ -1.47
HMGB3P24-201ENST00000433260 USP36Q9P275 1121 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms