RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ATG13O75143 517 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 MT-CO1P00395 513 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 PCCBP05166 539 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 RXRGP48443 463 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 DEFA1P59665 94 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 DEFA3P59666 94 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 CSNK2BP67870 215 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 TRIP10Q15642 601 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 ZNF621Q6ZSS3 439 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 UTP15Q8TED0 518 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 SELENOMQ8WWX9 145 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 HGH1Q9BTY7 390 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 PIH1D1Q9NWS0 290 aaKnown RBP10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 PCDHA3Q9Y5H8 950 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 COLEC10Q9Y6Z7 277 aa10.06□□□□□ -0.8
CLTCL1-202ENST00000427926 PPP1R3GB7ZBB8 358 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 BLKP51451 505 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 GAD2Q05329 585 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 INAQ16352 499 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CEP78Q5JTW2 689 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 FAM228AQ86W67 206 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 ERP27Q96DN0 273 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 JSRP1Q96MG2 331 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 KCTD14Q9BQ13 255 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CDT1Q9H211 546 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 PRDM16Q9HAZ2 1276 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CDHR5Q9HBB8 845 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 IL17RBQ9NRM6 502 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 ZNF780BQ9Y6R6 833 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 GPR25O00155 361 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CES1P23141 567 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 PCYT1AP49585 367 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 TTPAP49638 278 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 ESRP1Q6NXG1 681 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CYB5D1Q6P9G0 228 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 TMC5Q6UXY8 1006 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 PIGZQ86VD9 579 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 MON1AQ86VX9 555 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 HEXDCQ8WVB3 486 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 PURBQ96QR8 312 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 PIF1Q9H611 641 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 MCCC2Q9HCC0 563 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 RABGEF1Q9UJ41 708 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 USP15Q9Y4E8 981 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 TMEM191CA6NGB0 347 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CYP3A4P08684 503 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 GRM5P41594 1212 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CASP7P55210 303 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 GUCY1A3Q02108 690 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 IL27RAQ6UWB1 636 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 TOP6BLQ8N6T0 577 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 FIG4Q92562 907 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 PRCCQ92733 491 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 ELMO3Q96BJ8 720 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 RNFT2Q96EX2 444 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 EXOC2Q96KP1 924 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 SEMA3CQ99985 751 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 L2HGDHQ9H9P8 463 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 ARHGEF4Q9NR80 690 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 COMMD8Q9NX08 183 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 C2CD2Q9Y426 696 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 DYTNA2CJ06 578 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 RGS5O15539 181 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 ERAL1O75616 437 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 S100A3P33764 101 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 GP5P40197 560 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CASRP41180 1078 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 TAS2R50P59544 299 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CRHR2Q13324 411 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CCINQ13939 588 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 SEC23AQ15436 765 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 GPAT3Q53EU6 434 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 KLHL24Q6TFL4 600 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 KCNT2Q6UVM3 1135 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 FBXL16Q8N461 479 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 KREMEN2Q8NCW0 462 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 PAFAH2Q99487 392 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 OSBPL1AQ9BXW6 950 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 SLC4A5Q9BY07 1137 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 ELL3Q9HB65 397 aaPredicted RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 INSL6Q9Y581 213 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 SPATA31C2B4DYI2 1134 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 FPGTO14772 594 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 CNOT3O75175 753 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 EPORP19235 508 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 RPL4P36578 427 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 TALDO1P37837 337 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 MAPK7Q13164 816 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 LRRC32Q14392 662 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 ACAP1Q15027 740 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 SF1Q15637 639 aaKnown RBP10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 MINDY4Q4G0A6 757 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 FAM45BPQ6NSW5 357 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 FUT10Q6P4F1 479 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 RAD9BQ6WBX8 426 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 HMGB4Q8WW32 186 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 KLHL1Q9NR64 748 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 KLQ9UEF7 1012 aa10.05□□□□□ -0.8
CLTCL1-202ENST00000427926 ERVK-11Q9UQG0 969 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms