RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CDH18Q13634 790 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 KYNUQ16719 465 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 KCTD19Q17RG1 926 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 GEN1Q17RS7 908 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 ACBD5Q5T8D3 534 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 MANEALQ5VSG8 457 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 CWF19L1Q69YN2 538 aaKnown RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 TAOK1Q7L7X3 1001 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 RIBC1Q8N443 379 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 NAT8LQ8N9F0 302 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 OR52K2Q8NGK3 314 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 FIBINQ8TAL6 211 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 PRCCQ92733 491 aaPredicted RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 TBC1D31Q96DN5 1066 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 SLC2A11Q9BYW1 496 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 ZYG11BQ9C0D3 744 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 USP29Q9HBJ7 922 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 C11orf16Q9NQ32 467 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 ABCB8Q9NUT2 735 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 NINJ2Q9NZG7 142 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 PPARGC1AQ9UBK2 798 aaKnown RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 MRPS17Q9Y2R5 130 aaKnown RBP15.94■□□□□ 0.14
SHOX2-202ENST00000425436 SIT1Q9Y3P8 196 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 HEY1Q9Y5J3 304 aa15.94■□□□□ 0.14
SHOX2-202ENST00000425436 A0A1B0GVM2 712 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 TLDC2A0PJX2 215 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 TCAF2A6NFQ2 919 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 EEF2KO00418 725 aaKnown RBP15.93■□□□□ 0.14
SHOX2-202ENST00000425436 ACSL3O95573 720 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 CHRNB1P11230 501 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 GOT1P17174 413 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 DRD1P21728 446 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 EPHB2P29323 1055 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 GRIA2P42262 883 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 CDH4P55283 916 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 PPP2R2AP63151 447 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 LMAN2Q12907 356 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 SEMA3BQ13214 749 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 HIF1AQ16665 826 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 SLC45A4Q5BKX6 768 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 TTC39BQ5VTQ0 682 aaPredicted RBP15.93■□□□□ 0.14
SHOX2-202ENST00000425436 RNF43Q68DV7 783 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 ZC3H18Q86VM9 953 aaKnown RBP15.93■□□□□ 0.14
SHOX2-202ENST00000425436 CCDC117Q8IWD4 279 aaPredicted RBP15.93■□□□□ 0.14
SHOX2-202ENST00000425436 PDIK1LQ8N165 341 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 SH2D3CQ8N5H7 860 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 TERB1Q8NA31 727 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 PJA1Q8NG27 643 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 CPT1BQ92523 772 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 NELL2Q99435 816 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 EPAS1Q99814 870 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 SAYSD1Q9NPB0 183 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 ZDHHC4Q9NPG8 344 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 NDFIP2Q9NV92 336 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 CWC15Q9P013 229 aaKnown RBP15.93■□□□□ 0.14
SHOX2-202ENST00000425436 NEU3Q9UQ49 428 aa15.93■□□□□ 0.14
SHOX2-202ENST00000425436 CUL9Q8IWT3 2517 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 A0A0A0MRY4 1105 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 CLDN11O75508 207 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 GCATO75600 419 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 PHBP35232 272 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 GDF10P55107 478 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 TPI1P60174 286 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 MAGOHP61326 146 aaKnown RBP15.92■□□□□ 0.14
SHOX2-202ENST00000425436 CCINQ13939 588 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 TMEM215Q68D42 235 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 CXorf57Q6NSI4 855 aaKnown RBP15.92■□□□□ 0.14
SHOX2-202ENST00000425436 NPNTQ6UXI9 565 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 CHST9Q7L1S5 443 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 PRUNE1Q86TP1 453 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 LMLNQ96KR4 655 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 KLC2Q9H0B6 622 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 BRD8Q9H0E9 1235 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 GGA2Q9UJY4 613 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 SLC27A6Q9Y2P4 619 aa15.92■□□□□ 0.14
SHOX2-202ENST00000425436 MYO18AQ92614 2054 aaKnown RBP15.92■□□□□ 0.14
SHOX2-202ENST00000425436 C5orf60A6NFR6 353 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 E7EVH7 732 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 NCAM2O15394 837 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 KCNN4O15554 427 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 CDH16O75309 829 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 STK10O94804 968 aaKnown RBP15.91■□□□□ 0.14
SHOX2-202ENST00000425436 PABPC1P11940 636 aaKnown RBP15.91■□□□□ 0.14
SHOX2-202ENST00000425436 RHOQP17081 205 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 MZF1P28698 734 aaPredicted RBP15.91■□□□□ 0.14
SHOX2-202ENST00000425436 OR1E1P30953 314 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 MDH1P40925 334 aaKnown RBP15.91■□□□□ 0.14
SHOX2-202ENST00000425436 CSKP41240 450 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 PDK1Q15118 436 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 C2orf27AQ580R0 203 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 TNFAIP8L3Q5GJ75 292 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 NLRP14Q86W24 1093 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 APCDD1Q8J025 514 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 TFB1MQ8WVM0 346 aaKnown RBP15.91■□□□□ 0.14
SHOX2-202ENST00000425436 SORCS1Q8WY21 1168 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 KIAA1522Q9P206 1035 aaPredicted RBP15.91■□□□□ 0.14
SHOX2-202ENST00000425436 ZNF212Q9UDV6 495 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 FETUBQ9UGM5 382 aa15.91■□□□□ 0.14
SHOX2-202ENST00000425436 INTS6Q9UL03 887 aaKnown RBP15.91■□□□□ 0.14
SHOX2-202ENST00000425436 NUP205Q92621 2012 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms