RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.27■□□□□ 0.04
CALD1-206ENST00000424922 A0A1B0GVM2 712 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 TCAF2A6NFQ2 919 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 SOBPA7XYQ1 873 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 MATN3O15232 486 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 TBL1XO60907 577 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 DNAJC8O75937 253 aaPredicted RBP15.27■□□□□ 0.04
CALD1-206ENST00000424922 PRAMEF12O95522 483 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 APRTP07741 180 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 KRT15P19012 456 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 ACVRL1P37023 503 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 SCTRP47872 440 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 WDR4P57081 412 aaKnown RBP15.27■□□□□ 0.04
CALD1-206ENST00000424922 YBEYP58557 167 aaPredicted RBP15.27■□□□□ 0.04
CALD1-206ENST00000424922 ZNF177Q13360 481 aaPredicted RBP15.27■□□□□ 0.04
CALD1-206ENST00000424922 SPARCL1Q14515 664 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 PARP15Q460N3 678 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 TEX44Q53QW1 395 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 HP1BP3Q5SSJ5 553 aaPredicted RBP15.27■□□□□ 0.04
CALD1-206ENST00000424922 TIGD7Q6NT04 549 aaPredicted RBP15.27■□□□□ 0.04
CALD1-206ENST00000424922 C3orf62Q6ZUJ4 267 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 CHST9Q7L1S5 443 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 TRPM8Q7Z2W7 1104 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 FAM217AQ8IXS0 508 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 OR52K2Q8NGK3 314 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 RIN3Q8TB24 985 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 WDR83Q9BRX9 315 aaKnown RBP15.27■□□□□ 0.04
CALD1-206ENST00000424922 RETREG1Q9H6L5 497 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 FGFR1OP2Q9NVK5 253 aa15.27■□□□□ 0.04
CALD1-206ENST00000424922 BRWD1Q9NSI6 2320 aa15.27■□□□□ 0.03
CALD1-206ENST00000424922 DOCK8Q8NF50 2099 aa15.27■□□□□ 0.03
CALD1-206ENST00000424922 A0A0D9SEW6 157 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 J3KR12 359 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 ZBTB24O43167 697 aaPredicted RBP15.26■□□□□ 0.03
CALD1-206ENST00000424922 PAPLNO95428 1278 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 TAC1P20366 129 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 PSMB4P28070 264 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 TTC39BQ5VTQ0 682 aaPredicted RBP15.26■□□□□ 0.03
CALD1-206ENST00000424922 SPATA21Q7Z572 469 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 ARID3BQ8IVW6 561 aaPredicted RBP15.26■□□□□ 0.03
CALD1-206ENST00000424922 PALM2Q8IXS6 379 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 TDRD5Q8NAT2 981 aaKnown RBP15.26■□□□□ 0.03
CALD1-206ENST00000424922 HJURPQ8NCD3 748 aaPredicted RBP15.26■□□□□ 0.03
CALD1-206ENST00000424922 GDAP1Q8TB36 358 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 VAT1Q99536 393 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 PRKAG3Q9UGI9 489 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 CDH22Q9UJ99 828 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 ARL2BPQ9Y2Y0 163 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.26■□□□□ 0.03
CALD1-206ENST00000424922 E2F8A0AVK6 867 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 TYW5A2RUC4 315 aaKnown RBP15.26■□□□□ 0.03
CALD1-206ENST00000424922 GFRA2O00451 464 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 TYROBPO43914 113 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 BANF1O75531 89 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 SSTR1P30872 391 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 FDFT1P37268 417 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 GNA12Q03113 381 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 SERINC3Q13530 473 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 PARP6Q2NL67 630 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 BBS9Q3SYG4 887 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 TPGS1Q6ZTW0 290 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 SUGP1Q8IWZ8 645 aaKnown RBP15.26■□□□□ 0.03
CALD1-206ENST00000424922 CARNMT1Q8N4J0 409 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 EFHBQ8N7U6 833 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 FBF1Q8TES7 1133 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 DDI1Q8WTU0 396 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 ZNF419Q96HQ0 510 aaPredicted RBP15.26■□□□□ 0.03
CALD1-206ENST00000424922 TEKT5Q96M29 485 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 SP110Q9HB58 689 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 ZMYM5Q9UJ78 669 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 TRHDEQ9UKU6 1024 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 SLC12A4Q9UP95 1085 aa15.26■□□□□ 0.03
CALD1-206ENST00000424922 RHOCP08134 193 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 CD68P34810 354 aaPredicted RBP15.25■□□□□ 0.03
CALD1-206ENST00000424922 MTM1Q13496 603 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 SEMA5AQ13591 1074 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 SPRED3Q2MJR0 410 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 TMEM184AQ6ZMB5 413 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 CPXM2Q8N436 756 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.25■□□□□ 0.03
CALD1-206ENST00000424922 CNTD1Q8N815 330 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 GBP7Q8N8V2 638 aaPredicted RBP15.25■□□□□ 0.03
CALD1-206ENST00000424922 OR7D4Q8NG98 312 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 ALKBH8Q96BT7 664 aaKnown RBP15.25■□□□□ 0.03
CALD1-206ENST00000424922 PABPC5Q96DU9 382 aaKnown RBP15.25■□□□□ 0.03
CALD1-206ENST00000424922 CYTH2Q99418 400 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 MAGEH1Q9H213 219 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 MLXIPLQ9NP71 852 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 IGSF9Q9P2J2 1179 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 TBC1D30Q9Y2I9 924 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 TTLL3Q9Y4R7 772 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 TEX264Q9Y6I9 313 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 H0Y626 953 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 RASSF9O75901 435 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 ZWINTO95229 277 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 NFKB1P19838 968 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 FOXN2P32314 431 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 MSH2P43246 934 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 RGS19P49795 217 aa15.25■□□□□ 0.03
CALD1-206ENST00000424922 ANO4Q32M45 955 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms