RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SHROOM3Q8TF72 1996 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 COL27A1Q8IZC6 1860 aaPredicted RBP13.25□□□□□ -0.29
VRK3-203ENST00000424804 PRAMEF26H0Y7S4 382 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 ENDOD1O94919 500 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 CALB1P05937 261 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 SKILP12757 684 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 UNGP13051 313 aaPredicted RBP13.25□□□□□ -0.29
VRK3-203ENST00000424804 ARRB1P49407 418 aaPredicted RBP13.25□□□□□ -0.29
VRK3-203ENST00000424804 KLHL30Q0D2K2 578 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 OVGP1Q12889 678 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 MTA1Q13330 715 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 FGL2Q14314 439 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 RTP5Q14D33 572 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 SLC25A52Q3SY17 297 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 TDRD12Q587J7 1177 aaKnown RBP13.25□□□□□ -0.29
VRK3-203ENST00000424804 LINGO4Q6UY18 593 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 IRF2BP2Q7Z5L9 587 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 DSG4Q86SJ6 1040 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 SETD3Q86TU7 594 aaPredicted RBP13.25□□□□□ -0.29
VRK3-203ENST00000424804 FAM131BQ86XD5 332 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 CACTIN-AS1Q8N1I8 211 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 OXR1Q8N573 874 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 OR7D4Q8NG98 312 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 JOSD2Q8TAC2 188 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 RFFLQ8WZ73 363 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 KLK6Q92876 244 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 BMFQ96LC9 184 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 PPP1R9BQ96SB3 815 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 MAGEB5Q9BZ81 275 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 HAUS4Q9H6D7 363 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 GPR27Q9NS67 375 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 UCKL1Q9NWZ5 548 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 ACTL7AQ9Y615 435 aa13.25□□□□□ -0.29
VRK3-203ENST00000424804 LY6G6EA0A0G2JKS1 128 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 A0A1W2PQU0 124 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 ANKRD62A6NC57 917 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 C1QTNF3-AMACRE9PGA6 284 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 SIGLEC6O43699 453 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 SDC3O75056 442 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 TPM3P06753 285 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 RHOCP08134 193 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 KRT3P12035 628 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 JUPP14923 745 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 PRLRP16471 622 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 CKMT2P17540 419 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 DGKAP23743 735 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 ACP1P24666 158 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 SDC4P31431 198 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 INSM1Q01101 510 aaPredicted RBP13.24□□□□□ -0.29
VRK3-203ENST00000424804 C15orf59Q2T9L4 293 aaPredicted RBP13.24□□□□□ -0.29
VRK3-203ENST00000424804 TMEM259Q4ZIN3 620 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 SLC45A4Q5BKX6 768 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 ARSIQ5FYB1 569 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 HES3Q5TGS1 186 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 NEK5Q6P3R8 708 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 DNAJC24Q6P3W2 148 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 GCNT7Q6ZNI0 430 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 DPY19L3Q6ZPD9 716 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 ABI3BPQ7Z7G0 1075 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 HORMAD1Q86X24 394 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 DNAAF5Q86Y56 855 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 SLC22A18ASQ8N1D0 253 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 DCAF4L2Q8NA75 395 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 ATP11CQ8NB49 1132 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.24□□□□□ -0.29
VRK3-203ENST00000424804 HDAC8Q9BY41 377 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 XPO4Q9C0E2 1151 aaKnown RBP13.24□□□□□ -0.29
VRK3-203ENST00000424804 MUC3BQ9H195 1237 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 FZD3Q9NPG1 666 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 MYO6Q9UM54 1294 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 NEU3Q9UQ49 428 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 PAXBP1Q9Y5B6 917 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 U3KQA8 63 aa13.24□□□□□ -0.29
VRK3-203ENST00000424804 GCN1Q92616 2671 aaKnown RBP13.23□□□□□ -0.29
VRK3-203ENST00000424804 MGAQ8IWI9 3026 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 SLC31A1O15431 190 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 BNIP3LO60238 219 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 F9P00740 461 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 CDK4P11802 303 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 GPD1P21695 349 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 ITPKBP27987 946 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 KRT83P78385 493 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 ARF5P84085 180 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 STAT4Q14765 748 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 SETMARQ53H47 684 aaPredicted RBP13.23□□□□□ -0.29
VRK3-203ENST00000424804 MANEALQ5VSG8 457 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 E4F1Q66K89 784 aaPredicted RBP13.23□□□□□ -0.29
VRK3-203ENST00000424804 SEL1L3Q68CR1 1132 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 ACAD10Q6JQN1 1059 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 C22orf39Q6P5X5 142 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 DCUN1D2Q6PH85 259 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 ARCQ7LC44 396 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 TFAP2DQ7Z6R9 452 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 PHF13Q86YI8 300 aaPredicted RBP13.23□□□□□ -0.29
VRK3-203ENST00000424804 OR13H1Q8NG92 308 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 KLHDC7BQ96G42 594 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 MCEEQ96PE7 176 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 HAPLN3Q96S86 360 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms